Xanthomonas translucens pv. undulosa: FD63_03770
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Entry
FD63_03770 CDS
T03961
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FD63_03770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtn03021
]
FD63_03770
03400 DNA repair and recombination proteins [BR:
xtn03400
]
FD63_03770
Enzymes [BR:
xtn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FD63_03770
Transcription machinery [BR:
xtn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FD63_03770
DNA repair and recombination proteins [BR:
xtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FD63_03770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AKK66659
LinkDB
All DBs
Position
861891..866114
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTALERRQLLTEEQFLTARQEHGDDFDAAM
GAEAVYELLRTIDLQSEMTRLREEIAGTGSETKLKRLTKRIKLVEAFLESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHECGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANIAEVKRAYDNR
AVELHAKVKVRITETVIDEDGGRSKKTSIVDTTIGRALLAEILPEGLPFALANTELTKKN
ISRLINSSYRQLGLKDSVVFADKLMYTGFAYATRAGVSIGIDDMLIPDEKKGILTEAEAE
VLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTEKVTNAKGETIDQKSMN
SLYIMADSGARGSQAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVQEYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEPDCGTTEGLTMTPIVEGGDVVEPLRDRVL
GRVVAEDVFLPGNDEDPIVTRNTLLDEQWVAKLEEAGVQTLKVRSTITCASSFGVCARCY
GRDLARGHLVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNITVKTTGSIK
FNNLKSVEHASGSLVAVSRSGELSVLDGHGRERERYKLAYGATITAKDGDAVKAGQSVAN
WDPHNHPIVSEVAGFIRFIDFIDGVTVIEKTDDLTGLASREITDPKRRGAQAKDLRPIVR
IVDGKGNDLTIPGTDLPAQYLLPPRSIVNLQDGAAVGVGDVVAKIPQEASKTRDITGGLP
RVADLFEARKPKDPAILAERSGIISFGKDTKGKQRLIIKDTDGSEHEELIPKYRQIIVFE
GEHVAKGETVVDGEPSPQDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEVITRQM
LRKVEITDQGNSKFLNGEQAERQRVIEENARLGNRNELPAKYDPVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTSDTLRGLKENVIVGRLIPAGTGLAYHSLRRRNSSGLTESE
MQTLSGGNAEPAVEAPAPAPAAASSEE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctcaacctcttcaaccagcagcgccagacgctggacttcgacgcgatc
aagatcgcgttggcctcgccggacctgatccgttcgtggtccttcggcgaggtgaagaag
ccggaaacgatcaactaccggaccttcaagcccgagcgcgacggcctgttctgcgccgcc
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgtggcgtggtctgcgagaagtgcggcaccgaagtgaccctggccaaggtgcgccgcgag
cgcatgggccacatcgacctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccctcgcgcatcggcctgatgctggacatgaccctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctacgtggtgaccgagccgggcctgaccgccctggagcgccgccagctgctg
accgaagagcagttcctgaccgcgcgccaggagcacggcgacgacttcgacgccgcgatg
ggcgccgaggcggtgtacgagttgctgcgcacgatcgacctgcagtcggaaatgacccgc
ctgcgcgaagagatcgccggcaccgggtcggaaaccaaactcaagcgtctgaccaagcgc
atcaagctggtcgaagccttcctcgagtcgggcaaccgtccggagtggatggtgatgacc
gtgctgccggtgctgccgccggatctgcgcccgctggtgccgctggacggcggccgcttc
gcgacctccgatctaaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgcgc
cgcctgctcgaactcaatgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaatcggtggatgcgctgctggacaacggccgccgcggccgtgccatcaccggcaccaac
aagcgcccgctgaagtcgctggccgacatgatcaagggcaagcagggccggttccgccag
aacctgctcggcaagcgcgtggactactcgggccgttcggtcatcgtggtcggcccgacc
ctgcgcctgcacgagtgcggcctgccgaagaagatggcgctggagctgttcaagccgttc
gtgttcgccaagctgcagcgtcgcggcctggccaccaccatcaaggccgccaagaagctg
gtcgagcgcgaagaagccgaagtctgggacatcctggaagaggtcatccgcgagcatccg
gtgctgctgaaccgtgcgccgaccctgcaccgcctgggcatccaggccttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcatccgctggtgtgtaccgcgttcaacgccgac
ttcgacggcgaccagatggccgtgcacgtgccgctgtcgctggaagcgcagctcgaagcg
cgcgcgctgatgatgtccaccaacaacatcctgtcgccggccaacggcgagccgatcatc
gtgccgtcgcaggacgtggtgctgggcctgtactacatgagccgcgccctggagaacaag
aagggcgaaggcatggtgttcgccaacatcgccgaagtgaagcgtgcctatgacaaccgt
gcggtcgaactgcacgccaaggtcaaggtccgcatcaccgagacggtgatcgacgaggac
ggcggccgcagcaagaagacctcgatcgtggacaccacgatcgggcgcgcgctgctggcc
gaaatcctgccggaaggcctgccgttcgcgctggccaacaccgagctgaccaagaagaac
atcagccgcctgatcaactccagctaccgccagctgggtctgaaggacagcgtcgtgttc
gccgacaagctgatgtacaccggcttcgcttacgcgacccgcgccggcgtgtcgatcggc
atcgacgacatgctgatcccggacgagaagaagggcatcctgaccgaggccgaggccgaa
gtgctggaaatccaggagcagtaccagtccggcctggtcaccgccggcgagcgctacaac
aaggtcgtggacatctggtcgcgcaccaacgagcgcatcgccaaggcgatgatggacacc
atcggtaccgagaaggtcaccaatgccaagggcgagaccatcgaccagaagtcgatgaac
tcgctatacatcatggccgactccggtgcgcgtggtagccaggcgcagatccgtcagctg
gccggcatgcgcggcctgatggcgcgtccggatggctcgatcatcgagaccccgatcaag
gccaacttccgcgaaggcctgaacgtgcaggagtacttcaactccacccacggcgctcgt
aagggtctggccgataccgcgctgaagaccgccaactccggttacctgacccgtcgcctg
gtcgacgtggcgcaggacgtggtgatcaccgaacccgattgcggcaccaccgaagggttg
accatgaccccgatcgtggaaggcggcgacgtggtcgagccgttgcgcgaccgcgtgctc
ggccgcgtggtggccgaggacgtgttcctgcctggcaacgacgaggatccgatcgtcacg
cgcaacacgctgctcgacgagcagtgggtcgccaagctggaagaggccggcgtgcagacg
ctgaaggtgcgctccacgatcacctgcgcctcctcgttcggcgtgtgcgcccgctgctac
ggccgcgacctggcgcgtggtcacctggtcaacatcggtgaagcggtcggtgtcatcgcc
gcgcagtcgatcggcgagccgggtacccagctgaccatgcggacctttcacatcggcggc
gcggcatcgcgtgcggcggcggtggacaacatcacggtcaagaccaccggttcgatcaag
ttcaataacctcaagtcggtcgagcacgccagcggttcgctggtggcggtgtcgcgttcg
ggcgaactgtcggtgctcgatggccacggccgcgagcgtgaacgctacaagctggcctac
ggcgccacgatcaccgcgaaggacggcgacgcggtcaaggccggccagtcggtggccaac
tgggatccgcataaccacccgatcgtgtcggaagtggccggtttcatccgcttcatcgac
ttcatcgacggcgtcaccgtcattgagaagaccgacgatctgaccggcctggcctcgcgc
gagatcaccgatccgaagcgccgcggcgcccaggccaaggacctgcgcccgatcgtgcgc
atcgtcgacggcaagggcaacgacctgaccatcccgggcaccgatctgccggcgcagtac
ctgctgccgccgcgctcgatcgtcaacctgcaggacggtgcggcggtgggcgtgggcgac
gtggtcgccaagatcccgcaggaagcgtccaagacccgcgacatcaccggtggtctgccg
cgcgtagccgatctgttcgaggcgcgcaagccgaaggatccagcgatcctggccgagcgc
tcgggcatcatcagcttcggcaaggacaccaagggcaagcagcgcttgatcatcaaggac
accgatggttcggaacacgaagagctgattccgaagtaccgccagatcatcgtgttcgaa
ggcgagcatgtggccaagggcgagaccgtggtggacggcgagccgagcccgcaggacatc
ctgcgcctgctcggcgtggagccgctggccgcgtacctggtcaaggaaatccaggacgtg
taccgcctgcagggcgtgaagatcaacgacaagcacatcgaggtcatcacccggcagatg
ctgcgcaaggtcgagatcaccgaccagggcaacagcaagttcctcaacggcgagcaggcc
gagcgccagcgcgtcatcgaggaaaatgcccgcctgggcaaccgcaacgagctgccggcc
aagtacgacccggtgctgctgggcatcaccaaggcttcgctggccaccgagtcgttcatc
tccgcggcctcgttccaggagaccacccgcgtcctcaccgaggcggcggtccgcggcacc
agcgacacgctgcgcggcctgaaggaaaacgtgatcgtcggccgcctgatcccggccggt
accggcctggcctaccacagcctgcgtcgtcgcaactccagcggcctgaccgagtcggaa
atgcagaccctgtcaggcggcaacgccgagccggcggtcgaagcgccagcgccagcgccg
gcagcggccagcagcgaggagtga
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