Xanthomonas translucens pv. undulosa: FD63_03920
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Entry
FD63_03920 CDS
T03961
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FD63_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtn03021
]
FD63_03920
03400 DNA repair and recombination proteins [BR:
xtn03400
]
FD63_03920
Enzymes [BR:
xtn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FD63_03920
Transcription machinery [BR:
xtn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FD63_03920
DNA repair and recombination proteins [BR:
xtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FD63_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AKK66689
LinkDB
All DBs
Position
883917..884915
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRIHTGDSATLSLSKQGPGTVTAADIKTDHN
VEILNNDHVICHLTKDMAINMRLKIERGFGYQPAAARRRPDEETRTIGRLILDASFSPVR
RVAYAVESARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPASNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtgggccgcagatcgaacgccttacc
gacaaccgcgccaaggtcgtaatcgagcccttggagcgcgggtatgggcatacgctgggc
aatgccctgcgtcgcgtgctgttgtcctcgatccccggcttcgcgatcaccgaagtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaagggctgcaggaggacgtgctggat
gtcctgctcaacctcaaggacgtggccatccgcatacacacgggtgacagcgccacgctg
tcgctgtccaagcagggtccgggcacggtcactgccgccgacatcaagaccgaccacaac
gtcgagatcctcaacaacgaccacgtgatctgccacctgaccaaggatatggcgatcaac
atgcgtctgaagatcgagcgtggcttcggctaccagccggctgccgcgcgtcgccgtccg
gacgaggagacccgcaccatcggtcgcctgatcctggatgcgtcgttctcgccggtgcgt
cgtgttgcctacgcggtcgaatctgcgcgcgtcgagcagcgcaccgacctggacaagctg
gtcctggacatcgagaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatccttagcgatcagctgtcggtgttcggcgacttcacccatcgcgaccgtggcgca
gccaagccggccagcaacggcgtggatccggtgctgctgcgtccgatcgacgatctggaa
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtggaactgctcaagaccccgaacctcggcaagaagtcgctgacc
gagatcaaggaagtgctggcccagcgtggcctgtcgctcggcatgaagctggagaactgg
ccgccggccggcgtcgcccagcacggcatgctcggctaa
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