Xanthomonas translucens pv. undulosa: FD63_08235
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Entry
FD63_08235 CDS
T03961
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtn03009
]
FD63_08235
Enzymes [BR:
xtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FD63_08235
Ribosome biogenesis [BR:
xtn03009
]
Prokaryotic type
rRNA helicases
FD63_08235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
AKK67463
LinkDB
All DBs
Position
complement(1873988..1875364)
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AA seq
458 aa
AA seq
DB search
MNDFDTLSLSPALAPGIDALGYTTMTPVQAQSLPPILAGSDVIVQAPTGSGKTAAFGLGL
LHKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEGDRMLDMGFEEPIREIASRCDKHRQS
LLFSATFPDAIRTLARELLHEPVEVTIEGADSAPEIEQQFFEVDPSYRQKAVAGLLLRFT
PESSVVFCNTRKEVDEVAGSLQQFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLAAVLNYELPTDTETYRHRIGRTARAGKRGLALSLVAPRELARAQALEAEQ
GQPLRWSRAPLATARPAQLPQAAMVTLRIDGGKTDKLRAGDILGALTGDAGLSGAAIGKI
AIYATRSYVAIAREHAGRALGQLQAGKIKGRRFRVSKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttcgacaccctgtccctctccccggcgctggcgccgggcatcgacgcgctc
ggctacaccacgatgaccccggtgcaggcgcagagcctgccgccgatcctggccggcagc
gacgtcatcgtgcaggcgcccaccggcagcggcaagaccgccgcgttcggcctgggcctg
ctgcacaagctggatccggcgctgacccgcgcgcaggcgctggtgctgtgcccgacccgc
gaactggccgaccaggtcggcaagcagctgcgcaagctggccaccggcattccaaacatg
aaactggtggtgctgaccggcggcatgccgcttggcccgcagctggcctcgctggaggcg
cacgacccgcaggtggtggtcggcacgcccgggcgcatccaggaactggcgcgcaagcgc
gcgctgcacctgggcggggtgcgcacgctggtactggacgagggcgaccgcatgctcgac
atgggcttcgaagagccgatccgcgagatcgccagccgctgcgacaagcaccgccagagc
ctgctgttttcggccaccttccccgatgcgatccgcaccctggcgcgcgagctgctgcac
gaaccggtcgaggtgaccatcgaaggcgccgacagcgcgccggagatcgagcagcagttc
ttcgaagtcgatccgagctaccggcagaaagccgtggcggggctgctgctgcgcttcacc
cccgaatccagcgtggtgttctgcaatacccgcaaggaggtcgatgaagtggccggctcg
ctgcagcagttcggcttctcggcgctggcgctgcacggcgacatggaacagcgcgaccgc
gacgaggtgctggtgcgcttcgtcaaccgcagctgcaacgtgctggtcgccagcgacgtg
gcggcgcgcggactggacgtggaagacctggccgcggtgctcaactacgaactgccgacc
gataccgaaacctaccgccaccgcatcggccgcaccgcgcgcgccggcaagcgcggcctg
gcgctgagcctggtggcgccgcgcgagctggcgcgcgcgcaggcgctggaggccgaacag
ggccagccgctgcgctggtcgcgcgcaccgctggccaccgcgcgcccggcgcagttgccg
caggcggcgatggtcacgctgcgcatcgacggcggcaagaccgacaagctgcgcgccggc
gacatcctcggcgcgctgaccggcgacgccggcctgtcgggcgcggcgatcggcaagatc
gcgatctacgcgacccgctcctacgtcgccatcgcccgcgagcacgccggccgggcgctg
ggccagctgcaggcgggcaagatcaagggccgccggttccgggtcagcaagctgtga
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