Xanthomonas translucens pv. undulosa: FD63_09895
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Entry
FD63_09895 CDS
T03961
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03410
Base excision repair
xtn03430
Mismatch repair
xtn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FD63_09895
03430 Mismatch repair
FD63_09895
03440 Homologous recombination
FD63_09895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtn03400
]
FD63_09895
DNA repair and recombination proteins [BR:
xtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FD63_09895
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FD63_09895
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FD63_09895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AKK67758
LinkDB
All DBs
Position
complement(2303537..2305267)
Genome browser
AA seq
576 aa
AA seq
DB search
MSPPLRITRRPAAEGGPWTDSVLPLLRRIYTARGAHDASLAQPKLAQLLPPDALSGIDAA
VALLASAIAAGKRILVVGDFDCDGATACAVAVRGLRLLGAAQVLHAVPNRMVHGYGLSPA
LVAELAPLQPDLLVTVDHGIACHAGVAAAKALGCQVLVTDHHLPGSVLPPADAIVDPNLA
GDAFPSKMLAGVGVIFYVLLALRRHLRERGAFATQAPDLSVLLDLVAVGTVADLVPLDTN
NRALVSAGLRRLQRGDGCIGLRALIEASGRDPARLSASDIGFALAPRLNAAGRLEDMALG
IELLLCEDPQQARAIAATLEQINGERRAVQQQMTDEAEATVAQALLAAPDAPPVAVCLFD
ADWHPGVIGLVASKMKDRLHRPVIAFAPAEPGSDQLRGSARSIPGFHIRDAMAAVDARRP
GLMDKFGGHAMAAGLSLPHAALAEFEQLFRAHALASLDAALLQAELLSDGALDPHELDHR
HAEALRLAGPWGQGFPEPLFDGEFEVLQWRLLKERHLKLSLRCAGRGEPLNAIHFNGWRG
DEPGRRVHIAYRLVADDYRGGDAVQLVVEHWRSLSG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgccgctgcgcatcacccggcggccggccgccgagggcgggccgtggacggac
agcgtgctgccgctgctgcggcgcatctacaccgcccgcggcgcccacgacgccagcctg
gcgcagccgaagctggcgcagctgctgccaccggatgcgctgagcggcatcgacgcggcg
gtcgcgttgttggcttcggcgatcgccgccggcaaacgcatcctggtggtcggcgatttc
gattgcgacggcgccaccgcctgcgcggtcgcggtgcgcgggctgcgcctgctcggtgcc
gcgcaggtgctgcacgcggtgccgaaccgcatggtgcacggctacggcctgtcgccggcg
ctggtcgccgaactggcgccgctgcagccggacctgctggtcaccgtcgatcacggcatc
gcctgccatgccggcgtcgccgcggccaaggcgctgggttgtcaggtgctggtcaccgat
caccatctgccgggcagcgtgttgccgccggccgacgcgatcgtcgatccgaatctggcc
ggcgacgcgtttcccagcaaaatgctggccggcgtcggggtgatcttctacgtgctgctg
gcgttgcgccggcacctgcgcgagcgcggcgcgttcgctacccaggcgccggatctgagc
gtgctgctggatctggttgcggtcggcaccgtcgccgacttggtgccgctggacaccaac
aaccgcgcactggtctctgcaggactgcgccgcctgcagcgcggcgacggctgcatcggc
ctgcgcgccttgatcgaagccagcggccgcgatccggcgcggctcagcgccagcgacatc
ggtttcgcgctggcgccgcggctcaacgccgccggccgcctcgaggacatggcgctgggc
atcgagctgctgctgtgcgaagacccgcagcaggcgcgcgcgatcgccgccacgctggaa
cagatcaacggcgagcgccgcgcggtgcagcagcagatgaccgacgaagccgaggccacc
gtggcgcaggcgctgctggccgcgccggacgcgccgccggtggcagtgtgcctgttcgat
gccgactggcatccgggcgtgatcggcctggtcgcctcgaagatgaaggaccgcctgcac
cgcccggtgatcgccttcgccccggccgagccgggcagcgaccagttgcgcggttcggcg
cgctcgattcccggcttccatatccgcgatgcgatggccgcggtggatgcacgccggccg
gggttgatggacaagttcggcggccatgcgatggccgcgggactgagcctgccgcacgcc
gcattggccgagttcgaacagctgttccgcgcgcatgcgctggccagcctggacgcggcg
ctgctgcaggccgaactgctcagcgacggcgcgctggatccgcacgaactggaccatcgc
catgccgaggcgctgcgcctggccgggccatgggggcagggcttccccgagccgttgttc
gacggcgagttcgaggtgctgcagtggcgcctgttgaaggaacgccacctcaagctgagc
ctgcgctgcgccggccgtggcgagccgttgaacgcgatccatttcaacggttggcgcggc
gacgaacccggccgccgcgtgcacatcgcctaccgcctggtcgccgacgactatcgcggc
ggcgacgcggtgcagctggtggtggagcactggcggagcctgtcgggctga
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