Xanthomonas translucens pv. undulosa: FD63_12525
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Entry
FD63_12525 CDS
T03961
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FD63_12525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtn03000
]
FD63_12525
03400 DNA repair and recombination proteins [BR:
xtn03400
]
FD63_12525
Enzymes [BR:
xtn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FD63_12525
Transcription factors [BR:
xtn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FD63_12525
DNA repair and recombination proteins [BR:
xtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FD63_12525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AKK68245
LinkDB
All DBs
Position
2886302..2887774
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AA seq
490 aa
AA seq
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MSQPTLDDHARYDRARLARDARFDGVFFTAVRSTGIYCRPVCPAPVPKRSNVHYYPSAAA
AAAAGYRPCLRCRPELSPDAQQHLGEESVRRALALIADGALQDASVERLAAEVGLSARQL
QRVFVGQLGATPAAVHATRRLLLAKQLLTETALPITQVALAAGFNSLRRFNAAFLEGCGM
PPSAIRKQRAEVPGGDLLLRLGYRPPLDFAAMLAFLRKRAIPGIERIGEASYERVLGPLD
ASTRIRVEADPQRHELRLQIAAADPRAIPDIVRRVRRIFDLDADLRAVHATLGAEPLLAR
AIARRPGLRVPGGWDGFEVAVRAVLGQQVSVAGAATLAARLVERHGAYRPGQPPGLDRAF
PAPQDLLDAPLEAIGLPRSRAATLRALAAAVAGGRLQFRAGQRLFEFVERATALPGIGAW
TAHYIALRALGQPDAFPAGDLVLQRMLGTDGARLSKRATDARAQAWRPWRAYAVLHLWHL
AGDPPEESPA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcccaccctcgacgaccacgcccgctacgaccgcgcccgcctggcccgcgat
gcgcgcttcgacggggtgttcttcaccgccgtgcgcagcaccggcatctattgccggccg
gtctgcccggcgccggtgcccaagcgcagcaacgtgcattactaccccagcgccgcggcc
gcggcggccgccggctaccgcccgtgcctgcgctgccggccggagctgtcgccggacgcg
cagcagcacctgggcgaggaatcggtgcggcgcgcactggcgctgatcgccgacggcgcg
ctgcaggacgccagcgtcgaacggctcgccgccgaggtcggactcagcgcgcggcagctg
cagcgcgtgttcgtcggccagctcggcgccaccccggcggcggtgcatgcgacgcggcgc
ctgctgctggccaagcaattgctgaccgagaccgcgctgccgatcacccaggtcgcgctg
gcggccggcttcaacagcctgcgccgcttcaacgccgcgttcctggaaggctgcggcatg
ccgccgtcggcgatccgcaagcaacgcgccgaggtgcccggcggcgatctgctgctgcgc
ctgggctatcgcccgccgctggacttcgcggcgatgctggcgttcctgcgcaagcgcgcg
atccccggcatcgagcgcatcggcgaggccagctacgagcgcgtgctcggcccgctcgac
gcctccaccaggatccgcgtcgaagccgacccgcagcgccacgaactgcgcctgcagatc
gccgcggccgatccgcgcgcgatccccgacatcgtgcgccgggtgcgccgcatcttcgac
ctggacgccgacctgcgcgcggtgcacgccacgctcggcgccgaaccgctgctggcgcgc
gcgatcgcgcggcgcccgggactgcgcgtgccgggcggctgggacggcttcgaggtggcg
gtgcgtgcggtgctcggccagcaggtcagcgtggccggcgcggcgaccctggccgcgcgt
ctggtcgagcgccacggcgcgtatcgaccgggccagccgcccggcctggaccgcgcattc
ccggcgccgcaggacctgctggacgcgccgctggaggcgatcggcctgccgcgctcgcgc
gccgccacgctccgcgctctggccgcggcggtggccggcggacgcctgcagttccgcgcc
ggccagcgcctgttcgagttcgtcgagcgcgcaaccgccctgcccggcatcggcgcctgg
accgcgcactacatcgcgctgcgcgcgcttggccaacccgatgcgttcccggccggcgac
ctggtcctgcaacgcatgctcggcaccgacggcgcgcgcctgagcaaacgcgccaccgac
gcccgcgcgcaggcctggcggccatggcgcgcctatgccgtgctgcacctgtggcatctg
gccggcgacccacccgaggagagtcccgcatga
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