Xanthomonas translucens pv. undulosa: FD63_16170
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Entry
FD63_16170 CDS
T03961
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn00260
Glycine, serine and threonine metabolism
xtn00460
Cyanoamino acid metabolism
xtn00630
Glyoxylate and dicarboxylate metabolism
xtn00670
One carbon pool by folate
xtn00680
Methane metabolism
xtn01100
Metabolic pathways
xtn01110
Biosynthesis of secondary metabolites
xtn01120
Microbial metabolism in diverse environments
xtn01200
Carbon metabolism
xtn01230
Biosynthesis of amino acids
xtn01240
Biosynthesis of cofactors
xtn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FD63_16170 (glyA)
09102 Energy metabolism
00680 Methane metabolism
FD63_16170 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FD63_16170 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FD63_16170 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FD63_16170 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FD63_16170 (glyA)
Enzymes [BR:
xtn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FD63_16170 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AKK68898
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Position
complement(3747972..3749225)
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AA seq
417 aa
AA seq
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MFPRAARIETYDPELAQAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRVKQLFGADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNVSGKLFNAVQYGVDEQGLIDYDEVERLALEHTPKMIVAGFSAYSQK
IDWARFRAIADQVGAVLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIIL
AKGASEELVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMAN
TLIARGYKIVSGGTENHLMLVDMIGKDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTS
GLRLGTPAITTRGYLEQDSIDLANWIADVLDAPADAAVIARVRDAVTAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgccgcccgcatcgaaacctacgatcccgaactggcccaggccatcgct
gccgaagccggccgccaggaagaccatgtcgaactgatcgccagcgagaactactgcagc
ccgctggtgatggaagcccagggcagccagctgaccaataagtacgccgagggttacccg
ggcaagcgctactacggcggctgcgaattcgtcgacatcgccgagcagctggcgatcgac
cgggtcaagcagctgttcggcgccgactacgcgaacgtgcagccgcattcgggctcgcag
gccaaccaggcggtgtacctggcgctgctgcagcccggcgacaccatcctgggcatgtcg
ctggcccacggcggccacctgacccacggcgccaaggtcaacgtttccggcaagctgttc
aacgcggtgcagtacggcgtcgatgagcagggcctgatcgattacgacgaagtcgagcgg
ttggcgctggagcacacgccgaagatgatcgtggccggcttctccgcgtattcgcagaag
atcgactgggcgcgctttcgcgccatcgccgaccaggtcggcgcggtgctgttcgtggat
atggcgcacgtggccggcctggtcgccgccggcgtgtatccgagcccgctggagcatgcg
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gccaagggcgcgagcgaggagctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtgatcgcggccaaggcggtggcgttcaaggaagcgctg
gagccggagttcaagacctaccagcagcaggtggtgaagaacgcgcaggcgatggccaac
acgctgatcgcgcgcggctacaagatcgtctccggcggcaccgagaaccacctgatgctg
gtggacatgatcggcaaggacgtgtccggcaaggacgcggaagccgcgctgggcaaggct
cacatcaccgtcaacaagaacgcggtgcccaacgacccgcgctcgccgttcgtgacctcg
ggcctgcgccttggcaccccggccatcactacccgcggctacctggagcaggacagcatc
gacctggccaactggatcgccgacgtgctcgacgccccggccgacgccgcggtgatcgcc
cgcgtccgcgacgcggtgaccgcgcagtgcaggaagtatcctgtgtatggctga
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