Xanthomonas translucens pv. undulosa: FD63_18995
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Entry
FD63_18995 CDS
T03961
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03030
DNA replication
xtn03410
Base excision repair
xtn03420
Nucleotide excision repair
xtn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FD63_18995
03410 Base excision repair
FD63_18995
03420 Nucleotide excision repair
FD63_18995
03440 Homologous recombination
FD63_18995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtn03032
]
FD63_18995
03400 DNA repair and recombination proteins [BR:
xtn03400
]
FD63_18995
Enzymes [BR:
xtn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FD63_18995
DNA replication proteins [BR:
xtn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FD63_18995
DNA repair and recombination proteins [BR:
xtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FD63_18995
NER (nucleotide excision repair)
GGR (global genome repair) factors
FD63_18995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AKK69403
LinkDB
All DBs
Position
complement(4390800..4393568)
Genome browser
AA seq
922 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNPAGEPTGALFGVVNMLRATLKERPEYVAFVVDAPG
KTFRDDLYAQYKANRPPMPDELRAQVEPMCQIVHALGISILREGGVEADDVIGTLALQGA
GDGLDVTISTGDKDFAQLVRPGVQLVNTMSGSRMDSDAAVMEKFGVWPSQIVDLLALMGD
AIDNVPGVDKCGPKTAAKWLAEYGSLDGVMANADAIKGKIGENLRAALARLPLNRELVTI
KTDVALPGGPRTLGLREQDPEQLRGLYQRYGFTQALRDLDGGVAAPAGAAEVTPSLRGTA
AGYARAAAPIDATLDPALAAKGEYTAIMTPAQLEDLLARLRAADGFAFDTETDALDAMRA
NLVGLSFAIEPGRADYLPLGHDYPGAPAQLDRTLALAALKPLLEDAAKPKIGQHGKYDLH
VLRRHGVDVRGYADDTMLESFVLNSTASRHDMDSLARRYLGYETVKYEDVAGKGAKQIAF
SQVAIDDATGYAAEDADITLRLHRALSAQLDAEPALASVYRDIEMPLVPVLTRIEANGVC
VDMAELRRQSQDLSQRMLAAQQKATALAGRTFNLDSPKQLQAVLFDELKLPALMKTPKGQ
PSTNEEALEAIAEQHELPRVILDYRGLAKLRSTYTDKLPDMINPDTGRVHTSYHQAGAAT
GRLSSADPNLQNIPIRTDDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSEDSGLLRA
FGAGVDVHRATAAEVFGRKLEDVTSNERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQD
YVALYFSRYPAVRDFMERMREQARSQGYVETLFGRRLYLNDINAKQQGLRAGAERAAINA
PMQGTAADIIKRAMVTVDAWLEQHRERALMILQVHDELVFEADADFVDTLLPEVTRRMAA
AAELKVPLVVDSGVGDNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccgattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
cccccgctgaccaaccccgccggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggagcgcccggagtacgtcgccttcgtggtcgatgcgccgggc
aagaccttccgcgacgacctgtacgcgcagtacaaggccaaccgcccgccgatgcccgac
gaactgcgtgcgcaggtcgagccgatgtgccagatcgtgcatgcgctgggcatcagcatc
ctgcgcgagggcggggtggaggccgatgacgtgatcggcacgctggccctgcagggcgcc
ggcgacggcctggacgtgaccatctccaccggcgacaaggactttgcccagctggtgcgc
cccggcgtgcagctggtcaacaccatgagcggtagccgcatggactccgacgcggcggtg
atggagaagttcggcgtgtggccgagccagatcgtcgatctgctggcgctgatgggcgac
gccatcgacaacgtgcccggcgtggacaagtgcgggcccaagaccgcggccaagtggctg
gccgaatacggctcgctggacggggtcatggccaatgccgatgcgatcaaaggcaagatc
ggcgagaacctgcgcgcggcgctggcgcggctgccgctgaaccgcgaactggtcacgatc
aagaccgacgtggccctgcctggcggcccgcgcacgctgggcctgcgcgagcaggacccg
gagcagctgcgcggcctgtaccagcgctacggcttcacccaggcgctgcgcgacctggac
ggcggggtggcggccccggccggcgccgccgaggtcacccccagcctgcgcggcaccgcc
gccggctatgcccgcgctgccgcgccgatcgacgccacattggacccggcgttggccgcc
aagggcgaatacaccgcgatcatgaccccggcgcagctcgaggacttgctcgcgcgcctg
cgcgcggccgacggcttcgccttcgataccgagaccgacgcgctggacgcgatgcgcgcc
aacctggtcgggctcagcttcgcgatcgaaccgggccgtgccgactacctgccgctgggc
cacgactaccccggcgcgccggcgcagctggaccggaccctcgcgctggcggcgctgaaa
ccgctgctggaggacgcggccaagcccaagatcggccagcacggcaagtacgacctgcac
gtgctgcgccgccacggcgtggacgtgcgcggctatgccgacgacaccatgctggagagc
ttcgtgctcaattccaccgccagccgccacgacatggattcgctggcgcggcgctacctg
ggctacgagacggtcaaatacgaggacgtggccggcaagggcgccaagcagatcgcgttc
tcgcaggtggccatcgacgacgccaccggctacgccgccgaggacgccgacatcaccctg
cgcctgcaccgcgcgctgtccgcgcagctggatgccgaaccggcgctggccagcgtctac
cgcgacatcgagatgccgctggtgccggtgttgacccgcatcgaggccaatggcgtgtgc
gtggacatggccgaactgcgcaggcagagccaggacctgagccagcgcatgctcgccgcg
cagcagaaggccactgcgctggccgggcgcaccttcaacctggactcgcccaagcagctg
caggcggtgctgttcgacgaactgaaactgccggcgctgatgaagacccccaaaggccag
cccagcaccaacgaagaggcgctggaggcgatcgccgagcagcacgaactgccgcgggtg
atcctggactaccgcggcctggccaagctgcgcagcacctacaccgacaagctgccggac
atgatcaatcccgacactggccgcgtgcacaccagttaccaccaggccggcgcggccacc
gggcggttgtcctcggccgatccgaacctgcagaacatcccgatccgcaccgacgacggc
cgccgcatccgccgcgccttcgtcgccccgcccgggcgcaagctgatcgcctgcgactac
tcgcagatcgaactgcggatcatggcccacctgtccgaggactcgggcctgctgcgcgcc
ttcggcgccggcgtggacgtgcaccgcgccaccgccgccgaagtgttcgggcgcaagctg
gaagacgtcacgagcaacgaacgccgcgccgccaaggcgatcaatttcggcctgatgtac
ggcatgagcgcgttcggcctggcccgcaacctgggcatcggccgcggcgaggcgcaggac
tatgtggcgctgtacttcagccgctacccggcggtgcgcgacttcatggagcgcatgcgc
gaacaggcgcgcagccagggttacgtggagaccctgttcggccgccgcctgtacctgaac
gacatcaacgccaagcagcaggggctgcgcgccggcgccgagcgcgccgcgatcaacgcg
ccgatgcagggcaccgccgcggacatcatcaagcgcgcgatggtaaccgtggacgcctgg
ctggagcagcaccgcgaacgcgcgctgatgatcctgcaggtgcacgacgaactggtgttc
gaggccgacgccgacttcgtcgacaccttgctgccggaagtgacccggcggatggccgcc
gccgccgaactgaaggtgccgctggtggtggatagcggcgtcggcgacaactgggacgag
gcacactag
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