Xanthomonas translucens pv. undulosa: FD63_19030
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Entry
FD63_19030 CDS
T03961
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03420
Nucleotide excision repair
xtn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FD63_19030 (uvrD)
03430 Mismatch repair
FD63_19030 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtn03400
]
FD63_19030 (uvrD)
Enzymes [BR:
xtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FD63_19030 (uvrD)
DNA repair and recombination proteins [BR:
xtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FD63_19030 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FD63_19030 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
InPase
Motif
Other DBs
NCBI-ProteinID:
AKK69410
LinkDB
All DBs
Position
complement(4400032..4402233)
Genome browser
AA seq
733 aa
AA seq
DB search
MDVSHLLDDLNPAQREAVSAPSGHYLVLAGAGSGKTRVLTHRIAWLNEVHGVPVHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWPDAKLPESFQVLDSDDQL
RLVKRVVQQLELDEGKFPPKQIMWWINQQKDEGRRAQHIQPEPRDEWTTTLRSAYALYQE
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRSRFSEILVDEFQDTNAIQYAFVRVLAGD
SGRVFVVGDDDQAIYGWRGAKVENVQRFLKDFPNAQTIRLEQNYRSSANILNAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYASYNEIDEARYVVERVRQWVRDGGSYSEAAVLYRSNAQ
SRAFEESLIAEQVPYRVYGGMRFFERAEIKDTLAYLRMVANRADDAAFERAVNTPTRGIG
DRTLDEVRRLARAQSLSLWAAAQQAAQQGGDLAARARNALAQFLGLIEQLSAEVAGLPLP
EQIDQVLARSALREHWSKESRGGLDSESRTDNLDELVSVASRFVRADNDEDADEGRQVMT
ELVGFLAYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLVGMEDGLFPSARSLEES
GRLEEERRLAYVGITRARHKLVLSYAESRRIHGQDNYNVPSRFLREIPRELLHEVRPKVQ
VSRSVSLGAPRNLGHSAIDAPAIRLGTNVQHPKFGGGVVIDYEGNGAHARVQVQFDEVGA
KWLVMAYANLTVL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctcccatttgctcgatgatctgaaccccgcccagcgcgaggccgtctccgca
ccgtccggccattacctggtcctggccggcgccggatccggcaagacgcgcgtgctcacc
caccgcatcgcctggctcaacgaagtccacggcgtgccggtgcacggcatctttgcggtc
accttcaccaacaaggcggccggcgagatgcgccaccgcaccgacctgcaactgcgcaac
ggcagccgcggcatgtggatcggcaccttccacggtctggcgcaccgcctgctgcgcctg
cactggcccgacgcgaagttgccggaaagcttccaggtgctggattcggacgaccagctg
cgcctggtcaagcgcgtggtgcagcagctggaactggacgagggcaagttcccgcccaag
cagatcatgtggtggatcaatcagcagaaggacgagggccgtcgcgcgcagcacatccag
cccgagccgcgcgacgagtggaccaccaccttgcgcagcgcctacgcgctgtaccaggag
cgttgcgaccgcgccggcctggtcgatttcgccgagctgctgctgcgcgcgcacgaactg
ttgcgcgacaacccggcattgctggcgcattaccgcagccgtttcagcgagatcctggtg
gacgagttccaggacaccaacgcgatccagtacgcgttcgtgcgcgtgctcgccggcgat
agcggccgcgtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctgaaggattttccgaacgcgcagaccatccgcctg
gagcagaactaccgctccagcgccaacatcctcaacgccgccaacgcggtgatcgcgcac
aacccggaccgcatcggcaagcagctgtggaccgattcgggcgacggcgacccgatcgat
ctgtacgcgtcctacaacgagatcgacgaggcgcgctacgtggtcgagcgcgtgcgccaa
tgggtgcgcgatggcggcagctacagcgaggcggcggtgctctaccgcagcaacgcgcag
tcgcgcgcgttcgaagaatcgctgatcgccgagcaggtgccgtaccgcgtctacggcggc
atgcgcttcttcgagcgcgccgaaatcaaggacaccctggcctatctgcgcatggtcgcc
aaccgcgccgacgatgcggcgttcgagcgcgcggtgaacacgcccacgcgcggcatcggc
gaccgcaccctggacgaagtacggcgcctggcgcgcgcgcagtcgctgtcgctatgggcg
gccgcgcaacaggccgcgcagcagggcggcgacctggccgcgcgcgcgcgcaacgcactg
gcccagttcctggggctgatcgaacaactgtccgccgaagtggccggcctgccgctgccc
gagcagatcgaccaggtgctggcgcgctcggcgctgcgcgagcactggagcaaggaaagc
cgcggcggcctggattcggaatcgcgtaccgacaatctcgacgaactggtctcggtcgcc
tcgcgcttcgtgcgcgccgacaacgacgaggacgccgacgagggccgtcaggtgatgacc
gagctggtcggtttcctggcctacgcctcgctggaggccggcgaaggccaggcccaggcc
ggcgaagagggcgtgcagctgatgacgctgcattcggccaagggcctggagttcccgctg
gtgttcctggtcggcatggaagatggcctgttccccagcgcgcgctcgctggaagagagc
gggcgcctggaggaagagcggcgcctggcctacgtcggcatcacccgcgcccgccacaag
ctggtgctcagctacgccgagtcgcggcgcatccacggccaggacaactacaacgtgccg
tcgcgcttcttgcgcgaaatcccgcgcgagctgctgcacgaagtgcggccgaaggtgcag
gtgtcgcgcagcgtctcgctgggcgcgccgcgcaacctcggccacagcgccatcgacgcg
ccggcgatccggctcggcaccaacgtgcagcatcccaagttcggtggcggcgtggtcatc
gactacgaaggcaacggcgcgcatgcgcgcgtgcaggtgcagttcgacgaggtcggcgcg
aagtggctggtgatggcgtacgcgaatctgacggtgctctga
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