Xenopus tropicalis (tropical clawed frog): 100036616
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Entry
100036616 CDS
T01011
Symbol
rnf31
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04217
Necroptosis
xtr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100036616 (rnf31)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100036616 (rnf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100036616 (rnf31)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100036616 (rnf31)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100036616 (rnf31)
Multi subunit type E3
LUBAC complex
100036616 (rnf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
IBR
Zn_ribbon_RanBP
UBA
Motif
Other DBs
NCBI-GeneID:
100036616
NCBI-ProteinID:
NP_001090644
Xenbase:
XB-GENE-968731
UniProt:
A0JP69
LinkDB
All DBs
Position
1:complement(139375344..139409882)
Genome browser
AA seq
986 aa
AA seq
DB search
MEEHPIRSALENALINQPGAVTPEFLNKMLYLPLRERYRRLSVEDLLKGGTQGGRFVLSL
YGYSQSLPDGLSFPDSVQEPDVSTVAAVTADVIILHHELNLLISNMHPRHEEAAQELLGG
ELPQQSLVADYVSAPKDPQPETTSAGCFLCGTLVCSVFCSSCNEMLCEECDKRAHSHPVR
AQHVRLPCGNTAKPRSLDQDSPSTVSSRPPWRCYSCHFENKGGSVLCVVCERPRGCTSSL
SNLSLGSTLQRDSWECQACTLQNSASAVLCAVCDRPRLASKPAQDGYDSVALLLRDIQRD
NKSITCPVSEKNGLFAMKNHQESMHEPESIGPLIDHTRQEEEIAKSEGWQCSHCTFFNTR
NGRVCEICDRTSEGTAATEQPKALDMAHVQEEIRQKRLREDGAKIVALIREGEKYGVLPE
EVCSAIRYSGTEVPQWWLQTELPYVLERLLDAASQKAGDTIGALTVEEARDAWVSSGGDM
DAAVILCVTERRRKVDALSGLGFPERHKVVAALYESAGDVGRALSILQRPLLEPFLIRMW
EEPQPPLRLDSADRQAVLRRLLAEHSLHSWGRAELALSLLIEGEGRYELQDVVEAVRESQ
DRDFIKRMLTQECAVCGWELPRNKMRSLTSCECCICPDCFRMHFTVAVKEKHIRDMICPA
CEEPEISDEGELLHYFSTLDILLRDTLEVDAYDLFHKKLTERTLMKDPKFLWCTHCSFGF
IYERDQLDVKCPQCQCSFCRKCKRPWEEQHRSLNCDDFQNWKRENDAEYQAQGLAVYLLE
NGITCPHCKFSYALARGGCMHFICSQCRHQFCSGCYNTFHQRNKCTVPSCTVRMSLHAHH
PRDCLFYLRDWDVTRLQRLLQMLLVQFNTDPPAGTQTAPGGGCRVMEQKEIPDGLRDEAC
GKITPPGYAGLCESHYKEYLVSRINAHSLDPCVLYDLAETMNVCQRYLPVLPLQDPTEDE
ASYRERLLGVLISEVPLSMNIPRKQN
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacatcctataaggagtgctctggaaaatgcattaattaatcaaccgggggct
gtgactcctgaattcctgaataaaatgttgtatttgcctttgagagaacggtatagaaga
ctaagtgtggaggatctactcaaaggagggacacagggtggacgatttgttctgtctctt
tatggctactctcagtcacttcctgatggtctaagttttccagattctgtgcaggaacca
gatgtctccactgttgctgctgtaacagctgatgtgattattcttcaccatgaactcaac
ctactcatctcgaacatgcacccacggcacgaggaagcagcacaagaactattaggtggt
gaactgccacagcagtctcttgttgctgattacgtaagtgctcctaaagatccacaacca
gaaaccacttctgctggctgttttctttgtggtactctagtttgttctgtgttttgttcc
tcttgtaatgagatgctctgtgaggagtgtgataagagagcacactctcatccagtccgt
gcccaacatgtgcgtttaccatgtggaaatacagcaaagcccaggtcattggatcaggac
tccccttctacagtgtcatctcgccctccttggagatgttactcttgccattttgaaaac
aaagggggttctgttctgtgtgtggtatgtgagcgcccccgtggctgtaccagcagcctt
tcaaacctatcacttggaagtactttacagagagacagctgggaatgccaggcttgtact
ctgcaaaattctgcatctgcagttctgtgtgcagtgtgtgatcgtccccgattggcaagc
aaaccagcccaggatggttacgattctgttgctttgcttttgagagatatacagagggat
aacaagagtatcacatgccctgtgagtgaaaaaaatggtctatttgccatgaagaatcat
caggagagtatgcatgaaccagaaagcattggtcctctgatagatcatacaaggcaagaa
gaggagattgctaaaagtgagggctggcagtgttcccattgcactttctttaacacacga
aatggacgtgtttgtgagatttgtgacaggaccagtgaggggacagcagcaactgaacaa
cccaaggcacttgatatggcacatgtgcaggaggagatccggcagaagcgactaagagag
gatggagctaaaatagtggcattgatccgggaaggagagaagtatggggttctacctgaa
gaggtgtgtagcgcaatacgatattctggtacagaagtgcctcagtggtggctgcagact
gaacttccctatgtattagagcgtctgctggatgctgcttcacagaaagcaggagataca
attggtgccctaacagtggaagaagctcgtgatgcttgggtgtccagtggtggagacatg
gatgctgctgtcatcttatgtgtgacagagcgaagaaggaaggttgatgcactctccggc
ctaggttttccagaaaggcataaagtggtagctgctctttatgaaagtgctggagatgtt
ggtagagcactaagtatattacagagaccacttctggagccttttcttatacgcatgtgg
gaagaaccacaaccaccccttcggctagactcggcagatagacaggcagttctccgtagg
ttacttgcagaacattccttgcacagttggggtcgggcagagctagctttgtcattgctt
attgaaggagaagggcgctatgaactccaggatgttgtagaggcagtgcgggaatcgcag
gacagagactttatcaaaaggatgttaacacaggagtgtgcagtgtgtggatgggagctc
ccccgtaacaagatgcgttctctaacctcatgtgagtgttgtatctgtcctgattgcttc
cggatgcatttcactgtagcagtgaaagagaaacatattagagacatgatatgtccagct
tgtgaggagccagaaataagcgacgagggggagcttcttcactatttctctactctggat
atcctgttacgggacactttggaggttgatgcatatgatttgttccataaaaaactaact
gaaagaacacttatgaaggacccaaagttcctgtggtgtacacattgttcctttggattc
atttatgaacgagatcagctggatgtaaaatgcccccagtgtcagtgcagtttctgcagg
aaatgcaagaggccttgggaagaacagcatcggtctttaaattgtgatgattttcagaac
tggaaaagggaaaatgatgcagaataccaagctcaaggattggctgtatacctgctagag
aatgggatcacctgtccccattgtaaattttcttatgctcttgcacgagggggatgcatg
cacttcatatgttctcagtgtcgccaccagttctgcagtggctgctataacacctttcac
caaagaaataaatgtacagtcccgtcctgtacggtaaggatgtctctccatgctcaccat
cctagagactgtctcttttacctccgagattgggatgtcacacgtctgcaaagactactc
cagatgttactggtacagtttaacacagatccacccgctggaacacaaactgctccagga
ggtgggtgtcgtgtgatggagcaaaaggagatacctgatggcctgagagacgaagcttgt
ggcaaaataacacctccaggatatgctggtttgtgcgagtctcattataaagaatatctt
gttagtcgtattaatgcccattctctggatccatgtgttctctatgatctggctgagact
atgaatgtgtgtcagcgctacctgcctgtattgcctctacaagatcccaccgaggatgag
gccagctacagggagcgtctcctgggggtgttaatatcagaggtgccactgagtatgaac
attccacggaagcagaattaa
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