KEGG   Xenopus tropicalis (tropical clawed frog): 100036617
Entry
100036617         CDS       T01011                                 
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
  KO
K24759  WD repeat-containing protein 90
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xtr03037]
    100036617 (wdr90)
Cilium and associated proteins [BR:xtr03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   100036617 (wdr90)
SSDB
Motif
Pfam: Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_CDC20-Fz Beta-prop_EML WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_1st EIF3I Beta-prop_TEP1_2nd CFA20_dom WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_SCAP WD40_RFWD3 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_LRRK2 Ge1_WD40 Vgb_lyase WD_LRWD1 Nucleoporin_N
Other DBs
NCBI-GeneID: 100036617
NCBI-ProteinID: NP_001090645
Xenbase: XB-GENE-5825492
UniProt: A0JP70
LinkDB
Position
9:14706622..14727869
AA seq 1848 aa
MAGVWQHPFVNVFKHLRLEEWKKSSKEGDVTSVMDKTLKCTVYRIRGSIPAGNYIQLPKT
SSQSLGLTGRYLYILFKPLPGKHFVVHIDVSAEDGQTVRISFSNLFKEFKSTATWLQFPF
VCGAIKGSVYDSTAQGARQGMVGPAPSGSRWTCLLLDVQYILSLYLSRRYSHLRSAKLCS
NLLVRNLMTSDLLFNPEVNFMEARHAKTLPDGISPMPREMSFPVPKGEKWHDLYDFIMFP
SDSSKLPYDSIQKGQSMVTAPGAPMSRSPARERPRSVTISKPVQDRVSLIQQITTPRPMP
HRSLLRVESVPERPVSVSARAEEARDLEDRSRGVEQDGGVHVYAHKTNKLSIHRHKSDSE
QVICTKVDRPETLSVPPECKKLLPDPIFNLRRIIGFGGCTECFALWTHTGCSVVYPCHAI
IVVLEVKTGEQRFLLGHTDKVSALAFNGSCTLLASAQTGSLSMVRLWHFQKGSCLAMFKT
HVHSVSYLSFSHSGTVLCGVGKDGHGKTMVVVWNTSQASRSGEVAVLAKAHTDIDIQTMK
IAFFDDTRMVSCGKDNVRLWRVRGGTLRSCPVNLGEYHMLEFSDLAFEAGHRPEKEAEDR
TLYVSSRSGHILEIDYKNVVLRNVRRVQPGQQQHSERRDKQTFSSGPGIAINSLSVSATF
CATGTEDGYLRLWPLDFSGVFLEAEHEGPVSCVAISPEGLRVLSCTSSGELGVLDVPSRG
YNTLMRSHTDTLLSFSCHPTHPQLVTVSSDNTIRIWDTGTLQQLYDFTAEEETPCAVTFH
PVRQAFACGFSSGTIRFFDITATALQAEHKQHRGAITGLLFSPDGSLMYSCCSLGSVALY
SIGHKEQHVLRVLGNVVCKDSERGPMALSLSSDGRLLAFVGPTEYTVTVMDARSLDELLR
VDVSILDLDSTTLDCALGLAFSPLKPHHLLVSTSGNKILWLDPKTGRLTREVTQVHKQCC
SSLAVSMDTRYMLTAGDRLLKVWDQRQPGTVRPQVFIGHSEAVQQVDFSPDQQSVISAGD
AVFIWDFLAAPDPEFTKTDCVPALPFALHSSAALDPSSEHRRDSTFISSGMPRGTAPRPC
ISSPPRLDISPVQGMDHPDLFSESDDGQEEEGNRDEQERTLVPDTRDNLVESDEQSSVVI
IECQPNRAKLLTGSKSNSSSLREGMVKSTHEPPRPDSYTHFHTRFKASCLAKGMCHPPEG
QEMLTLRALIGYNGNGRANMAWNPDTGFFSYTCGCVIVVEDLHSGSQRHWLGHPEEISTL
ALTNDALVLASASGSGDGSSLCQIRIWDTQDGSCMKILTHHRTEVQAMSYSRDDRLFVSI
GDYRDGNLALWSTKGYELLATSRLFQPVHAVTFNPAHFDDFASAGPGAVSFWRIETQGTD
TQIKVYRVAVPEEVGTAAELTSITYNSTSLLYSGCSTGQVCVWDCQTHRCFLTWEADQGE
IGILLCRGNRLLTGSNTRRIRLWCVAAVQELREKGSGASSTSVLMEHEMTLDGAIVSATF
DDALEMGIVGTTAGTLWYINWVENTSIRLISGHRNKVMDLAVAHGESHCATCGEDGSLRI
WSLQSCELLLQFQVLNQSCLCLAWSPQPKSGPSTEDQRIAAGYSDGTIRIFSVSKTEMEM
KIHPHPCAVTSIAYSTSGDVLLTGGKDGQMAITSPRTGMTIRVLSDHKGSPITTIECTGR
KLTGLPTDGELWLAASTDRRVSIWASDWSKDKCELLDWLSFPAPTSQKDLDVSVPTLAAF
CPWQPGTVVYSGFGVEKEILFYSLIQKQVLLRIPLSHFATSLTLSPAASLIAVGSNERLL
RLIDTSAGTKQDFAAYDDGVHLCRVSPSGNLLLTASYNQVLVWDIQNS
NT seq 5547 nt   +upstreamnt  +downstreamnt
atggctggagtctggcagcacccatttgtaaatgtcttcaagcacttgcggttggaagaa
tggaagaaatccagcaaggagggggatgtgaccagcgtcatggacaagacccttaaatgt
acagtgtacagaatccgcggctccattccagccggaaactacatccaactgccaaaaacc
agctctcagtccctgggtctgaccgggcgctatctctacatcttgttcaagcctctgccc
gggaaacactttgtggtgcatatagatgtgagcgcagaggatggtcagaccgtcaggatc
tccttctccaatctatttaaagagttcaagtccacagcaacatggctgcagttcccattt
gtatgcggagcaataaaggggtcggtgtacgacagcacagcgcagggggcgcggcaagga
atggtaggccctgccccctcaggctcccgctggacctgtctcctattggatgtccagtac
attctgtctctgtacctaagccgtaggtacagccacctgaggagtgccaagctctgctct
aacctgcttgtgaggaacttaatgaccagcgacctgctcttcaacccagaagtgaacttc
atggaggcacgacatgcaaagaccctccctgatggcatttctcctatgcctcgcgagatg
tcattccctgttcccaagggcgagaagtggcatgacctatatgactttattatgttcccc
tctgatagctccaaactgccctacgactccatacagaagggccagtctatggtgacggcc
cctggtgcccccatgtctcgcagccccgctcgggaacgtccccgttctgttactattagc
aaacctgtacaggacagagtgtctctaatccagcagataaccacccccagaccgatgccc
catagaagtctgttacgggtagaatctgttcctgaacggcctgtctctgtaagcgcgagg
gcagaggaggcaagagatttggaggaccgcagcagaggtgtggaacaagatggaggagtt
catgtttacgcacacaagacaaacaagctctcaatccataggcacaaatctgactctgaa
caggtgatttgtactaaagtggacagaccagagactttgtcagtgccccccgagtgcaag
aaacttcttcctgacccaattttcaatctcaggagaattattggttttggtggatgcaca
gagtgctttgcgctctggactcatactggctgctctgtggtgtatccatgccatgccatt
atagtggttctcgaagtgaagacaggagaacaaagatttttgttgggtcatactgacaag
gtctcggctctggcctttaatggcagctgcactctgctggcgtcggcacagacaggttcc
ctcagcatggtgcgactctggcacttccagaaaggcagctgtctcgccatgttcaaaact
catgttcactccgtctcatacctcagtttctcacacagcggaactgttttatgcggcgtt
gggaaagacggccatggaaaaacaatggtggttgtatggaatacgtctcaggcgagccgg
agtggggaggtcgcagtgttggctaaagctcacacagacattgacatccagaccatgaaa
attgctttctttgatgacacgcggatggtctcatgtgggaaggataacgtgcgcctctgg
cgggtacgcggtgggactttgcgttcctgtccagtgaatttgggcgaataccatatgctg
gagtttagcgatttggcttttgaggctgggcataggcctgagaaggaagccgaggacagg
accctgtatgtgagcagccgtagtggccacatactggaaatagactataagaatgttgtt
ctgcgcaacgtgaggcgggtccagccaggtcagcagcagcacagtgagcgtcgggacaaa
cagactttctcttcaggtcctggcattgctatcaacagcctcagtgtttctgcaacattc
tgtgccacgggcacagaagatggctatttgcgtctgtggccattggatttttctggggtc
ttcctggaagctgaacatgaaggacctgtgagctgtgtggctattagcccagaaggtctg
cgcgtcctgtcctgtacctcaagcggggagctgggggtcctggatgtgccttctcgcggc
tacaacacgctaatgcgctcccacacagatacgctgctctctttctcctgtcaccccacc
cacccacaactcgtcacagtgtctagtgacaataccatccggatctgggatactggcact
ctgcagcagctatatgacttcacagcagaagaagagaccccctgtgctgtgaccttccac
cccgttcgacaggcctttgcctgtggtttcagcagcggcaccatcaggttcttcgacatc
acagctacagctctgcaggcggagcataagcagcatcgaggtgcaatcacaggcctgctc
ttttctcctgatggtagcctcatgtacagctgctgctctcttggctccgtggcactgtac
agcattgggcacaaggagcagcatgtcctgcgggtactaggcaatgtggtatgcaaggac
tctgagaggggccctatggctctgtctttgagcagtgatggccgtctccttgcctttgtg
ggtcctacagaatacacagtaaccgtgatggatgcccggtcattagatgagctcctacgc
gttgatgtgagcatcctggatttagatagtactactctggactgtgctctgggcctggcc
ttcagccctctcaagccccaccaccttctggtgagcacctccggcaacaagatcttatgg
ctggacccaaagactggacgtcttacaagagaagtgacccaggtacacaagcagtgctgc
tcctctctagcggtgagcatggatacccggtacatgcttacggcaggggacaggctcctc
aaagtatgggatcagcggcaaccagggactgtccgacctcaggtgtttatcggtcactct
gaagctgtacagcaggtggatttctctccagaccagcaatcggtcatcagtgccggcgat
gctgttttcatatgggatttcttggcagcccctgatcctgagtttacaaagacagactgt
gtaccagcgcttccatttgcactgcactccagtgccgcactagatcctagctctgagcac
cggagggattctacattcatctcttctgggatgccacggggtacagccccccgaccttgc
atttcctcccctccgcggttagacatcagccccgtacagggtatggaccacccagatctc
ttctcagagtctgatgatgggcaggaagaggaagggaacagagacgagcaggaaaggacg
ctggttccagacactagagacaatctagtggaaagtgatgaacagtcttcagtggtcatc
attgagtgtcagcccaacagggccaaactactcacgggctctaaaagcaacagtagcagc
ctaagggaaggtatggttaagtcaacccatgagccaccacgtcctgattcatacacacat
ttccacactcgctttaaggcttcctgtttagccaagggaatgtgccatccccctgagggg
caggagatgctgactctgagagcactgattgggtacaatggcaatggccgagccaacatg
gcgtggaacccagacacagggttcttctcgtacacttgcggctgtgtaattgtggtggag
gacctgcactctggatcccagcgacactggctggggcaccctgaggaaatctccaccttg
gctctcaccaatgatgccctagtcttggcttcagcttcaggatcaggggatggttcatcc
ttgtgtcagatccgtatctgggacacccaagatggctcctgcatgaagatactgacgcac
caccgcacagaggtgcaggcaatgagctactcccgagatgaccgtctctttgtcagtatc
ggtgactacagagatggcaaccttgccctgtggagtacaaagggctatgagctcttggcc
accagtcgcctcttccagccagtgcacgcagtcaccttcaaccctgcacacttcgatgac
tttgcaagcgcgggccctggggctgtcagcttctggaggatagagactcaagggactgac
acgcagataaaggtgtacagagtggcggttccagaagaggttggtacagcagcagagctg
acctccatcacatataactccacgtccctgctgtacagcggctgcagcacaggacaagtg
tgtgtgtgggactgtcagactcaccggtgcttcctgacgtgggaagccgaccagggggag
atagggattctgctgtgcagagggaacaggttactgactgggagtaatacgcgcaggatc
cggctgtggtgtgtggctgctgtgcaggaactgagagaaaaaggctccggcgccagctct
acgtctgtccttatggagcacgagatgacactggacggcgccattgttagtgccacgttt
gatgatgccttggagatgggaattgtgggcaccacggctggtacactctggtacattaac
tgggtggagaatactagcatccgactgatcagcggccataggaacaaggtgatggatctg
gcggttgctcacggtgagagccactgtgccacatgtggggaggatggcagcttacggatc
tggtccctgcaaagctgtgagttgctccttcagttccaagttctcaaccagagctgctta
tgtctagcctggagcccccaacccaagtctggcccgtccacagaagatcagagaattgcc
gcgggctacagcgacggcaccatcagaatattcagcgtctccaaaaccgagatggaaatg
aaaatacatcctcatccgtgtgcagtaacctccatcgcgtactccacttctggcgacgtt
cttctgactggtggaaaggatgggcagatggccattaccagcccacgtacaggaatgacc
attcgagtcttaagtgaccacaagggatcacccatcaccacgattgagtgcaccggcagg
aagctgactgggcttcctacggatggagaactttggttggctgcaagcacagacaggcgt
gtcagtatctgggcttctgattggtcaaaggataaatgtgagctattggactggctaagc
ttcccagctcctactagccagaaggatctggatgtgtctgtgcccaccctggcagcattc
tgtccttggcagcctggcactgtggtgtattcgggatttggggtggaaaaagaaattcta
ttctacagtctcatccagaagcaggtgctgctgaggatcccactctctcactttgccacg
tctcttaccctgtctcccgcggcgtcgcttatagccgtcggcagtaatgagcgactcctg
cgtctcatcgacacctcagctggcaccaaacaagattttgcagcctacgatgacggcgta
catctctgccgagtatctccctcgggcaacttactgctcacggcttcatataatcaagtg
ctggtgtgggacattcagaattcatag

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