Xenopus tropicalis (tropical clawed frog): 100036621
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Entry
100036621 CDS
T01011
Symbol
prom1
Name
(RefSeq) prominin-1 precursor
KO
K06532
prominin 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100036621 (prom1)
04090 CD molecules [BR:
xtr04090
]
100036621 (prom1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100036621 (prom1)
CD molecules [BR:
xtr04090
]
Proteins
100036621 (prom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF1218
Sec23_helical
DUF445
HsbA
Motif
Other DBs
NCBI-GeneID:
100036621
NCBI-ProteinID:
NP_001090649
Xenbase:
XB-GENE-853793
UniProt:
E9LYZ5
LinkDB
All DBs
Position
1:complement(28015313..28097380)
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AA seq
884 aa
AA seq
DB search
MAFTLYLVFLLFCGCTLSERTLPLNSAPARLDFGYVPTESYETDAYHEPGAIGMLFQIVQ
GFLYIVQPHAFPQDLVRKVAQQKFGEIRNDYQKPENVVLTLQTIHYEIGFIIAAVLGLLF
LLLMPLVGLCFCMCRCCDNCGGEMHQRQKKNGDCQRGCYATFLFVTTLLISVGVICAYAA
NQNLTNQIRGSKKLVQTNFKDLKTLLNDTPMQIDYVLSKFNVTKDKALSEMNNLGPLLGE
RVHERLGKDVRPAFDAVLNMAGAIKETKEALENVSVSVEVLQEAIDKLNINLTEAKLQLT
STLSDPACSANVAIIPCNKIANSLNQLYINANFSMLPDLTHNLIRLNEVLRTDLSNLVQK
GYAAFNLTPEMVQNQTRNIEGDMKNVMESIGANITSFSKTIPVLQIMSNISNHITQSETY
VREFYPVVEQYDFYRWLGSLVLCCMVALIVVFYYLGLLCGTCGYDQQTSPTTRGCISNTG
GNFLMAGVGFSFIFSWILMLIVLVTFLAGGNVEKLVCEPFQERALFKVLDTPYLINSQWK
NYLSGVLYQNPSVNLTFEKVYSDCKENKGIFTALQIDNLFNLNEFLNINMYIDEISSRIE
TLNLDLSNIILLDEKGKRNLEDFSSTGIDEIDFDAFLSEVAKSNTKVDLLAFANELEENA
DLLPKGALGNALKGHANSIRTIHIQQVVPLEQSMTTLNQSIKLLQRTSFDIEGKVLDVIT
AVEAAQNLINNNASSVIKQESKKLMDEVIGYFIQYVQWVKDSIAFDVAGCKPVANVIDTA
VDVFLCSYIVDSVNSFWFGLGGATVLLIPAIIFAIRLAKFYRRMDTEDVYDDVETVPMKN
LENGNNGYQNEYLYGIHNPVMASMSSYDTLNRFPRASAPPRHID
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggctttcactctatacttggtttttctactgttctgtggatgtactctgtcagaaaga
actctgcccttgaacagtgccccggcacggctggattttggttatgtgcccactgaaagc
tacgagacggatgcgtaccatgaacctggagctattgggatgttatttcaaatagtgcaa
ggattcctatacattgtgcagccgcatgcctttccccaggatcttgtgagaaaggttgcc
cagcagaagtttggtgaaattcgtaatgattaccaaaagccagaaaatgtggtcctcact
ctgcagacaatacactatgaaattggctttatcatcgcagcagtacttggactcctgttt
ttgctgctgatgccgctggtgggcctgtgtttctgcatgtgtcgctgctgtgacaactgt
ggtggggagatgcatcagaggcaaaagaaaaatggtgactgccagaggggctgctatgcc
acttttctctttgtaaccaccttgctgatcagtgtgggtgtgatctgcgcatatgctgcc
aaccagaaccttactaaccagatcagaggatcaaagaaactggtgcaaaccaactttaaa
gacttaaagaccctactaaatgacactccaatgcaaatcgattatgtactgagcaagttc
aatgttacaaaggacaaagccctatctgaaatgaacaatctcggacctttgcttggtgag
cgcgtccatgagcgccttgggaaagatgtccgacctgcttttgatgcggtacttaacatg
gcaggagctatcaaagaaacaaaggaagcattggagaatgtaagcgtgtctgtggaagtg
ctgcaggaagccattgacaagttgaacataaacctgacagaggccaagttgcagctcact
agtacactcagcgaccccgcgtgttcagccaacgttgccatcattccctgcaataaaatt
gccaattcgctgaatcagctgtacatcaatgcaaacttcagcatgcttcctgatctaact
cacaatcttatcagattaaatgaagtcctccgaacagatcttagcaacttggttcaaaag
ggctatgcggcatttaatcttactcctgaaatggtacaaaaccaaactcgaaatattgag
ggagatatgaaaaatgtcatggaatccatcggggcaaacattaccagcttttctaaaaca
atccctgttcttcagatcatgtccaatataagtaatcatattactcagagtgagacttat
gtgcgggagttttaccctgtggtagaacaatatgacttctacagatggctgggctctctt
gttctctgctgtatggtggccctcattgttgttttctactacctgggattgctgtgtggc
acctgcgggtatgatcagcaaacatctcccacaacaagaggctgcatctccaacactggg
ggcaactttcttatggctggtgttggatttagcttcatcttctcttggatactcatgctc
attgtgcttgttaccttcctcgctggaggaaatgtggaaaaactggtttgtgagcccttt
caggagagagccctgttcaaggttttggatacaccctacctgataaattcccagtggaaa
aattacctttctggagttttgtatcaaaatcccagtgtaaatctgacttttgaaaaggtt
tacagtgactgcaaagaaaacaagggaattttcactgcacttcagatcgacaatctattt
aatctgaacgaatttctaaacatcaatatgtatattgatgaaatttcatcaagaatcgaa
acactgaatttggacttgagtaatattattttgctggatgaaaaaggaaaaagaaattta
gaagactttagttctacggggattgatgaaatcgattttgatgctttcctgtcagaggta
gcaaaaagcaatacaaaggtagatctcttggcatttgctaatgaattggaagaaaatgca
gacttgctgccaaaaggagcattaggcaatgcgttaaagggacatgcaaatagtatacgg
acgatacatattcagcaggttgtgccactggagcagtcaatgactacactaaaccaaagc
attaagctgctacagaggacgtcatttgatattgaggggaaggtactggatgttatcaca
gctgtggaggctgctcagaatctcataaacaacaacgcttcttcagtcataaaacaggag
tccaaaaagttaatggatgaagtcattggctactttattcagtatgtccagtgggtaaaa
gattcaattgccttcgacgtagcaggctgcaagccagttgccaatgtaatagacaccgca
gtagatgtgtttctgtgcagctatatagtagactctgtgaattccttttggtttggtttg
ggaggagcaactgtgcttttaattccagccatcattttcgcaatccgattagcaaaattc
tatcgcagaatggacactgaagatgtttatgatgatgttgaaactgttcccatgaaaaat
ttggaaaatggtaataatggttatcaaaatgagtatttatatggtattcacaatcccgtt
atggcaagcatgtcttcatatgacacactgaataggttccctcgagcctctgccccacca
agacatattgattga
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