Xenopus tropicalis (tropical clawed frog): 100036688
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Entry
100036688 CDS
T01011
Symbol
clasp1
Name
(RefSeq) CLIP-associating protein 1
KO
K16578
CLIP-associating protein 1/2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100036688 (clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100036688 (clasp1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100036688 (clasp1)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
100036688 (clasp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT_GCN1
XMAP215_CLASP_TOG
HEAT
HEAT_MROH2B_C
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_2
PIK3R4-like_middle
Adaptin_N
Ltn1_1st
HEAT_DAAF5
Dopey_N
Sec7-like_HUS
MMS19_C
ParcG
TTI1
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
100036688
NCBI-ProteinID:
NP_001090708
Xenbase:
XB-GENE-6049805
UniProt:
A1A5G0
LinkDB
All DBs
Position
9:complement(<89403495..89492744)
Genome browser
AA seq
1452 aa
AA seq
DB search
MEQGMDYWLGQIQQKDVGKRLQVGPDLMEYLSDRQKSIDLEQDQTVLDRMVDGLATSWVN
SSNYKVALLGMDILSALVTRLQDRFRSQIGTVLPSLMDRLGDAKDSVREQDQNLLIKIME
QASNPQYVWERMFSGFKHKNFRTREGVCLCLIATLNVYGAHSLTLSKIVPHICNLLGDPN
SQVRDAAINCLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGTMILSSADKN
FDDEDSVDGNRPSSASSSASSKAPQAARRGVSLGTARRPGTSSAAPKPGGTAKEGAGGVD
EEDFIRGFEDVPTVQIYSSRDLEESLNKIREILSDDKHDWEQRISALKKIRSLLLAGAAE
YDTFFPQLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTVFNLV
PNSAKIMATSGVVAIRLIIRQTHVPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTH
SLERHVSVLAETIKKGIHDADSEARIVARKCYWGFHSHFSKEAEQLFHTLESSYQKALQS
HLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTVSRASTATSKSTPGSLQRSRS
DIDVNAATCAKSKATSGASAAPFSSVAALPPGSYASLGRIRTRRQSSGSTTSTASTPADT
RGRSRAKVVSQSQPGSRSSSPGKLLGSGYGGIASGPQRVPQMPSSEKRSKIPRSQGCSRE
TSPSRIGLDRFGISQPGRIPSAMRVLSSSTDLEAAVADALKKPVRRRYEPYGMYSDDDAN
SDASSACSERSYSSKNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLIGLQNLLKSQRT
LSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFILLTQLLKKMG
ADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQ
MDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKT
FQDGATKLLHNHLKNSSNSSMGSPSNTIGRTPSRHSSSRASPLTSPTNCSHGGLSPSMLD
YDTENLNSDEIYSSLRGVTEAIEKFSFRSQVDLNEPVRREGKKESELGSCDVGIASPASD
LRGGTDMVEGGRMALDNKTSLLNTQPPRAFTGPRGREYNPYAYSDSINSYDKTALKEAVF
DDDMDQLRDVPIDHSDLVADLLKELSNHNERVEERKGALCELLKITREDSLAVWEEHFKT
ILLLLLETLGDKDHAIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRA
AEEAASTLAGSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQILPDII
PGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGGKMKLLNLYIKRAQTTNS
NSSSSSDVSTHS
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggaatggactactggctggggcagatacagcagaaggatgtgggcaagagg
ctgcaggttggaccggacctgatggaatacctgtcggacagacagaagtccatagacctg
gagcaggaccagactgtgctggatagaatggtcgatggacttgccacttcctgggtgaat
tctagtaattataaggtggccctgctgggcatggacattctgtcggcgctggtgacccga
ctgcaggatcgattcagatcacagattggcacagtgctgcccagtttaatggaccggtta
ggggatgccaaggactcggtgcgggagcaggaccagaacctgctgataaagataatggaa
caagcctccaacccacagtacgtgtgggaacggatgttttcgggattcaaacacaagaat
ttccgcacgcgggaaggagtctgcctctgccttattgccaccctcaatgtgtacggagcc
cacagtctgacactcagtaagattgtaccgcatatctgtaacctactgggggatcccaat
agccaggtccgagatgctgcaataaactgcctcgtagagatctacagacacgtaggggaa
cgcgtccgagcggatctcagcaagaaagggctgccccaatcacgactgaatgtcattttc
accaaattcgatgaggtgcagaaatcggggaccatgattctctcctctgccgataaaaac
tttgatgatgaagattccgtcgatggcaaccgaccctcatcggccagttcttctgcctcc
tctaaagcccctcaagctgcccgcaggggggtgagtctgggcaccgcccgccggcctgga
acctcgagtgccgcgcccaagccgggaggaaccgccaaggagggagcggggggagtggat
gaggaggattttatccgagggtttgaagatgttccgactgtccagatctactccagccga
gacctggaagaatctctgaacaagatccgcgagatcctctctgatgataaacacgactgg
gagcagcgaatcagcgctctgaagaagatccggtcgttgctgttagcgggggcagcagaa
tatgacactttcttcccgcagctccgcctcctcgatggagcctttaaactgtcggccaag
gacttgcgctcccaggttgtgcgggaggcctgtatcaccctggggcacctctcctcagtg
ctggggaacaagtttgaccatggggcagaagcgatcatgccaacggtcttcaacctggtc
cccaacagtgccaaaatcatggccacctccggcgtcgtagccatccggctaatcatacgt
caaacgcacgtcccaaggttgatccccatcatcaccagtaactgcacctccaagtccgtc
gccgttagaaggcgctgctatgagtttttggatctgctgctacaggaatggcaaacgcac
tcgctggaaaggcatgtatcggtgttagcggagaccatcaagaaggggatacatgatgcg
gattcagaagcaaggatcgtcgcaaggaagtgctactgggggttccacagccatttcagt
aaggaggcagagcagctgttccacacgttggagtcttcctaccagaaagccctgcagtcc
catctgaagaactcggacagtatcgtgtctctgccccagtcggaccggtcctcctccagc
tcccaggagagcctcaaccgcccactctcggccaaaagaagccccacgggcagcactgtg
tctagagcctcaacagctacttccaaatccacccccggctccctgcagcgctcccgtagc
gacatcgatgtgaatgccgccacctgcgctaaatccaaggcaacgtccggagcctccgct
gcccccttcagctctgtcgccgccctgccgcccggatcctacgcctccctgggtcgcatt
cgcaccagaagacagagttccggcagcaccaccagcacggcctctaccccagcagacacc
cgcgggcgcagccgagccaaagtcgtgtcgcagtcacagcccggcagccggtccagctca
ccagggaagctcctgggaagtggctatggggggatagcgagcggcccccaacgggtcccc
cagatgccctcctctgagaagagaagcaagatcccccgcagccaggggtgcagcagggag
accagcccaagcaggattggcttagatcgctttgggatcagccaaccagggaggatcccc
tcggcaatgcgcgtcctgagttccagcacagacctggaggcggccgtggcagatgcgctg
aagaagccggtgcgccggcgctatgagccctacggaatgtactcggatgacgatgccaac
agcgacgcgtcgagcgcctgctcggagaggtcctacagctccaagaatggcggcatcccg
cactacctgcgccaaacggaggatgtggccgaggtgctgaatcactgcgccagctccaat
tggtctgagaggaaggaggggctcattgggctgcagaacctgctcaagagccaaaggaca
ctcagccgcgtggaactgaaacggctctgcgagatcttcacccggatgtttgcggatcct
cacagcaagagagtgttcagcatgttcctggagaccctcgttgactttgtcataattcac
aaggacgacctgcaggactggctcttcatcctcctcactcagttactaaagaaaatgggc
gccgacctgctgggctccgtgcaggccaaagtgcagaaggcgctggatgtgaccagggat
tccttcccctttgaccaacagttcaacatcctgatgagattcattgtggatcagacccag
actcccaacctcaaggtgaaagtcgcgatactgaagtacatcgagtccctcgcccgacag
atggacccaacggactttgtcaactccagtgagacccgcctggctgtgtccagaatcatc
acttggacgactgagccgaagagttctgatgtcaggaaggcggcacaggtggtcttaatc
tctctgtttgagctgaacacccccgagttcaccatgttactgggggccctgcccaaaacc
ttccaggatggggccacaaagctcctgcataaccacctgaagaactccagcaacagcagc
atgggatccccgagcaacaccattggccgaactccttccaggcactcgagcagccgcgcc
agccccctcacatctcccaccaattgctcccacggtggcctctcccccagcatgctggat
tacgacactgaaaacctgaattcggatgagatttacagctccctgcggggggtgacggag
gccatcgagaagttcagtttccgcagccaagtggatctcaatgagcctgtgaggcgggag
ggcaagaaggagagtgagctgggctcctgtgatgtgggtatcgcctctccggccagcgat
ctccgggggggcacagacatggtggaagggggacggatggcgctggataacaagacctct
ctgctgaacacccagccgccccgggcattcactggcccccgcgggcgcgagtacaacccc
tacgcctactccgactccattaacagctacgacaaaacggcgctaaaggaggcggtgttt
gacgacgacatggaccagctgcgcgacgtgcccatagaccactcagacctggtggccgac
ctcctgaaggaactgtccaatcacaacgagcgggtggaggagcgcaagggggccctctgt
gagctgctgaagatcacgagggaagacagcctggccgtatgggaggaacatttcaagacc
attctgctgctcctgctggaaacactgggggacaaagatcatgccattcgcgccttggca
ctgcgggtactgagagagatcctgcggaaccagccggcccggtttaagaattacgcggag
ctgaccattatgaagacgctggaagcccataaagactcacataaagaggtcgtcagagcc
gcagaggaagcagcatcaaccctggccgggtccatccaccccgagcagtgcatcaaggtc
ctgtgccccatcatccaaactgccgactaccccatcaacctcgctgccatcaaaatgcaa
acgaaagtcattgagaggatttccaaggagtctctacaccagatcctcccggatatcatt
ccaggcttgttacagggctacgataacacagagagcagcgtccgcaaagcgagcgtcttc
tgcctggtcgccatctactctgtgattggagaagagctgaaaccgtacctggcgcaactg
actggcggtaagatgaagctgttgaacctgtatataaagagagcgcagacgacaaacagt
aacagcagctcctcgtcggatgtctcgacgcacagttag
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integrated database retrieval system
