Xenopus tropicalis (tropical clawed frog): 100036704
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Entry
100036704 CDS
T01011
Symbol
patj
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100036704 (patj)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
Motif
Other DBs
NCBI-GeneID:
100036704
NCBI-ProteinID:
XP_002931635
Xenbase:
XB-GENE-998168
UniProt:
A0A6I8Q3F8
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All DBs
Position
4:complement(85645535..85760427)
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AA seq
1829 aa
AA seq
DB search
MPENMNTGTVTVDKAQVLLIAERLQKKLKDKGDLSHHEKMCILRDTLKSPLFNQILTVQQ
SIKQLKEQLNRMPADRSAEFDFTKKGLLVFEADSSAHFGNKNNSLSFDNFVSSQLPLVSP
YSEDEFNRKLQQMAEGRQIEYIDIEKPSVGGLGFSVVALKNPTVGEAGVFIREVQPGSIA
DKDGRLKENDQILAINYIPLDMSVSHQESIAMLQQSSGSIRLVVAKAPVLNNFQALSNNL
DNQIQWGHVEDIELINDGSGLGFGIVGGKASGVIVRTIVSGGLADRDGRLKTGDHILQIG
DTNVQGMASDQVAQVLRNCGNSVKMVVARDPIERPSKPPAPATLPVGALPPKDVKGDNEN
TDNVYDIKLTKKEGQSLGITVVGYTGAFNGGSSGIYVKSIIPGSAADQSGCIQVQDRIIA
VDGVNIQDYSNQDVVAALRNTGQTVHLTLSRSKELLELVATERSLVRAVPGLPSDPPVPE
INKSSANEENQEQVDNYKNEMITGSLSPQTSILKSKWEQRLGPDYLVMVVNLDPKIDDDA
ELQKYSKLLPIHTMRLGVELDSFDGHHYISSIAPEGPVAKLGIFQPEDELLEVNGVQLYG
KSRREAVSFLKEVPPPFTLVCCRRMVDDENETFVDVPNTLDTKDNKNEIPVTEEEDQTVQ
SSERSNSEYAQPLENLVTEEDDGELAMWSSEVKVVELEKDSGGLGFSILDYQDPLDPART
VLVIQSLVSNGVAETSGQILPGDRLVFVNDNYMDNASLEDAVQILTSVPPGRTRLGICKP
LVGSIKEEKDIYTNLEELEDNTDSTATDSVILDVFHKYKEGVFIQDEQEELVDEPSLNMG
KQFNIEHNKTGSLQESWEMQELEGYGGEREMLVDEEYTEQENFSEDSDHYFLQCEGIAMP
PGKDSGYSQPWMEDIHMDSGAMKFKLETQETMLCHQDDLQTGVSQGTVYSLKEPGIVFDP
DAIAQQKDREMMEDYTRIIHQKTQRNQLGASNELPEREEGEGEETPNFSHWGPPRIVEIW
KEPQVSLGISIVGGQSIIKRLKNGEELKGIFIKQVLENSPAGKTNALKTGDKILEVSGVD
LKNATHEEAVNAIKNSGNPVVFIIQSLSPTPRLMTAGNTKTSKYDKASTDSTVKTVSPVP
FSGGPPPMKLPPPYKESSDSHPLEMKAEEDSDDKIRQRYADLLGDLHIIELEKDKNGLGL
SLAGNKDRSRMSIFVVAINPDGPAGQDGRIHVGDELLEINNQIIYGKSHQNASAIIKGAP
STLKLVFIRNKDAVQQMAVNPDPLPESSLTDEEHCGLAVSGKGEETSFKEIMASVTESEA
KPAIDNQQKHSKSDTKISPDSQDVSLTSVPSYLPAESDISNYRNMPSPLPSFDPATCPII
PGQEMTIEISKGRSGLGLSIVGGNDTPLEAIVIHEVYEEGAAARDGRLWAGDQILEVNGV
DLRNASHEDAITALRQTPQKVQLTVYRDEAQYKDEENLDIFHVELQKKAGRGLGLSIVGK
RTGSGVFISDIVKGGAADIDGRLMQGDQIMSVNGDDMRNASQEIVATVLKCAQGLVHLEI
GRLRVGSWLASKKTFEASQINQMSSHGVLPPSLTPVISSMQDYASSKKSSADSSQRHSGT
DLEPRTVEINRGPYDALGISIAGGKGSPLGDIPVFIAMIQASGVAARTHKLKVGDRLVSI
NQQPVDGLSHAEVVNILKHAFGTIVLQVVADTNISAIASQLESMSLGQGVSSEHQVEDGE
SPVPKIIHLEKGGDGLGFSIVGGYGSPQGDLPIYVKTIFSKGAAAADGRLKRGDQILSVN
GESLEGVTHDEAVAILKKQRGNVTLSVLS
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaatatgaacacaggtactgttacagtagataaggcccaggtcctattgatt
gcggaacgactgcagaaaaaactgaaagacaagggggatctttctcaccatgaaaaaatg
tgtatcttgagggacactcttaagagtcctctctttaaccaaattttaacagttcagcag
tcaataaaacaattaaaggagcagctcaaccgaatgccagctgaccgctctgcagaattt
gatttcacaaagaaaggtttattggtatttgaagctgactcttccgcacactttgggaac
aagaacaactctttgtcctttgacaactttgtttcatctcaattacctcttgttagccct
tactcagaagatgagtttaacagaaaacttcaacagatggcagagggcaggcaaattgag
tatatagatatagagaaaccttctgtaggaggccttggatttagtgtggtagcactcaag
aatcccactgtgggagaggctggagtatttatcagagaagttcaaccaggaagcatcgca
gacaaggatggacggcttaaagagaatgaccagattttggctattaactatataccactg
gatatgagcgtatcccaccaagagtctatagcaatgcttcaacagtcatctggatccata
cgattagttgttgcaaaagcaccagttctaaacaacttccaagcattaagtaataatctt
gataaccagatccaatggggccatgtggaagacattgaactcattaatgatggttcagga
ttaggctttgggatcgtgggcggaaaagcaagtggagtaattgtcagaacaattgtatct
gggggattggctgatcgggatgggagattaaagacaggagaccatattttgcaaatagga
gacactaatgtccaaggaatggcaagtgatcaggttgctcaggttctgagaaactgtgga
aattcagttaaaatggtagtggctagagatcctatagaacgcccctcaaagcctccagca
ccagcaactctgccagtgggtgccttgcctcctaaagatgttaagggtgataatgaaaat
actgataatgtatatgacattaaacttacaaaaaaagaaggacagagtcttggcataaca
gtagttggatatactggcgcattcaatggtggttcttcaggaatttatgtcaaaagcata
ataccaggtagtgctgctgatcaaagtggatgcattcaagttcaagaccgaatcatagct
gttgatggtgtaaacattcaagattactcgaatcaagatgtggttgcagcattacgcaat
actgggcaaactgtccacctcacattgtccaggagcaaagaacttcttgaacttgttgcc
acagaaagatcccttgttagagcagtgccaggacttccgtctgacccaccagtgcctgaa
ataaacaagtcttctgctaatgaagaaaaccaggaacaagttgataactacaaaaatgag
atgataacaggttccttatctccacaaacaagtatattaaaatctaagtgggagcaacgc
ctcggtccggattatctggtcatggttgttaatctggatcccaagattgatgatgatgct
gaacttcagaaatactcaaagcttctgccgattcataccatgagattaggagtggaactt
gactcatttgatgggcatcattacatatcatccattgccccagaaggaccagttgccaaa
cttggaatttttcagcctgaagatgaactattagaggtaaatggagtgcagctttatgga
aaatcccgccgggaagcggtttcatttctaaaagaagtgccacctcctttcacattggtt
tgttgtcgacgtatggttgatgatgaaaatgagacatttgtggatgtaccgaacactttg
gatactaaagataataagaatgaaattcctgttacagaagaagaggaccaaactgtccag
tcatcagagagaagcaacagtgaatatgcacaaccattagagaacctggtaactgaagag
gatgatggagagttagcaatgtggtcatcagaagtaaaagttgtagagctggagaaggac
agtggggggctaggattcagtatactggactaccaggatcctttagatccagcaaggacc
gtccttgtaattcagtctctggtatcaaatggggtggcagaaacaagtggccagattttg
cctggcgatcgtttggtctttgtaaatgacaattacatggacaatgcttcattggaagat
gctgtgcaaatattgacatctgtgccacctggaaggacacgcctaggcatttgcaagccg
ttggtgggtagcattaaagaagaaaaagatatatatacaaatttggaagaacttgaagac
aacacagattctacagctacggattcagtgattctcgatgtttttcataaatacaaagag
ggggtattcattcaggacgaacaagaggaacttgttgatgaaccatcgttgaatatggga
aaacaatttaacatagaacacaataaaactggctctttgcaagagtcgtgggaaatgcag
gaattggagggatatggtggagaaagagagatgcttgtggatgaggaatacactgaacaa
gaaaatttttctgaggacagtgaccattactttttgcagtgtgaagggatagcaatgcca
ccgggaaaggattctggctacagccaaccatggatggaagacatacatatggattctggg
gctatgaagtttaaactggaaacacaggaaactatgctctgtcatcaggatgacttgcaa
acaggagtgagtcaaggtacggtttacagccttaaagaacctgggatagtattcgatccg
gatgcaattgctcaacagaaagaccgtgaaatgatggaagattatactaggatcatacac
cagaaaacccagcgtaatcagctgggtgcctctaatgaattgcctgagagagaagaagga
gaaggagaagaaactccaaatttcagtcactggggtcccccacgcatagttgaaatttgg
aaagaacctcaggtttcccttggaattagtattgttggtggacaatcaattataaaacga
ctgaagaatggagaagagctaaagggcatctttattaagcaagtgttggagaatagccct
gcaggaaaaacaaatgctttgaaaacaggagacaaaatacttgaagtatctggtgtagac
ttgaagaatgccacacatgaggaagcagtcaatgctatcaaaaattcaggaaatccagtg
gtttttattattcagagtttatctcctacaccaaggttaatgacagctggaaatacaaag
acatcaaaatatgacaaagcaagtacagactcaactgttaagactgtgtctcctgttcct
ttctctggaggtcccccaccaatgaagctgccccctccatacaaagaatcttctgattct
cacccattggaaatgaaagctgaagaagacagcgatgataaaataagacaaagatatgca
gacctccttggagatttgcatattattgaacttgaaaaggataagaatggactcggactc
agcctggctggtaacaaagaccgatctcgcatgagcatatttgttgtagcaataaaccca
gatggacctgcgggacaagatggtagaattcatgttggcgatgagctgttggagatcaac
aatcagattatttatggaaaaagccatcagaatgcgtctgcaattataaaaggagcccct
tcaacacttaagttggtgtttataaggaataaagatgcagttcagcagatggctgttaat
ccagatccattgccagagagttctcttactgatgaggaacattgtggacttgcagtttct
ggcaaaggagaagaaactagttttaaagaaatcatggccagtgtaacggagtctgaagca
aaacctgcaatagacaaccaacaaaaacactccaagagtgatacaaagatatctcccgat
tcacaggatgtatcattgacatctgttccttcttacctcccagcagaatcagacatcagc
aattacagaaatatgccgtctcctttgccttcatttgatccagcaacatgcccaataatt
cctggacaggaaatgacaattgaaatctccaaaggtcggtctggtcttggcctcagcatt
gtaggtggtaatgatacccctcttgaagctatagttatacatgaagtgtatgaagagggg
gcagcggccagagatggaagactctgggctggagatcagattttagaggtcaatggagtg
gatttgaggaatgcctctcatgaggatgcaatcacagcactaaggcagacacctcagaaa
gtacagctaactgtatacagagatgaagcccagtataaggatgaggaaaatctggatatc
ttccatgtagagttacaaaagaaagctggtagaggacttgggctgagcattgtgggtaaa
aggactggaagtggagtgtttatttctgacattgtaaaaggaggagctgcagatattgat
ggccgattaatgcaaggtgaccagattatgtcggttaatggagatgacatgcggaatgcc
tctcaagagattgtagcaactgtactaaagtgtgctcaaggacttgtacatctagagatt
ggaagacttcgagttggatcttggcttgcatccaaaaaaacctttgaagccagtcagatc
aaccaaatgagttcccatggtgttcttcctccatcattaactccagttatttccagcatg
caagactatgctagctccaagaaatcctctgcagactcatcacaaaggcattctggcaca
gacttggagccacggactgtagaaattaatagaggcccttatgatgctcttgggatcagt
atcgcaggagggaaaggcagcccattgggagatatcccagttttcattgctatgatccaa
gctagtggtgtagcagcacggacacacaaattaaaagttggggatcggcttgtcagcatt
aaccagcaaccagtggatgggctgtcacatgcagaagtggttaatatcctgaagcatgca
tttggaaccattgttttgcaggttgtggcagacacgaatattagtgcaattgcaagccag
ttggaaagcatgtctttggggcagggagtaagcagtgaacatcaagtggaagatggagag
tcacctgtaccaaaaattattcacttggagaaaggtggagatggccttgggttcagcatt
gtgggcggatacggaagcccacaaggagatctgccgatttacgtcaaaacaatattttca
aagggagcagctgcagctgatgggaggctgaaacggggagaccagattttgtcagttaat
ggtgagagcttggagggcgtcactcatgatgaagcagttgcaattttgaagaagcaaagg
ggaaatgtaacattaagtgtgttgtcatag
DBGET
integrated database retrieval system
