Xenopus tropicalis (tropical clawed frog): 100036707
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Entry
100036707 CDS
T01011
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1 precursor
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
xtr01100
Metabolic pathways
Module
xtr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100036707 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
100036707 (chsy1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
100036707 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
100036707 (chsy1)
Glycosyltransferases [BR:
xtr01003
]
Glycan extension
O-Glycan
100036707 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
100036707
NCBI-ProteinID:
NP_001090724
Xenbase:
XB-GENE-961883
UniProt:
F7BVZ9
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Position
3:complement(115829947..115867258)
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AA seq
812 aa
AA seq
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MAARSRHSLLSVLLGLVLGFLLASRFILPRAAELQRASRRRAGGGGVSGGQAGSCGRQSA
LRNDYSGVLGWQQRLHTDTGALSPASEEDIPTDKNFLFVGVMTAQKYLETRAVAAYGTWA
NSIPGKVEFFSSEGSDTSIPIPIVPLQGVDDSYPPQKKSFMMLKYMHDHYLDQYEWFMRA
DDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSRE
VLRRVVPHIGECLRQMFTTHEDVEIGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIR
DLHNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRYRTIQLHREIVLMSKYSNAEIH
KDDMQLGIAPSFMRFQPRQREEILEWEFLTGKYLYSTADGQPPRRGMDSSQKEALDDIVM
QVMEMINANAKVRGRIIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKKMTVPVRRH
AYLQQTFSKIQFMEHEEIDAKALANKINQESGSFYFLSNSLKMFVPFHLTASKTEHKEPK
ETKVNILVPLSGRFDMFARFMANFEKTCLIPNQNVKLVILLFNSDSNPDKTRQVELMRDY
RVKYPKADMQILPVSGEFSRALALEVGSSQFRNDSLLFFCDVDLVFSTEFIQRCRANTIL
GQQIYFPIIFSQYDPKIVYAGKVPSDNHYAFTQKTGFWRNYGFGITCVYKGDLLRAGGFD
VSIQGWGLEDVDLFNKVVQVGLKTFRSQEVGVVHIHHPVFCDPNLDPKQYKMCLGSKAST
YGSTQRLAELWLEKNDPMFGRTTHTNESVRTA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagaagtcgccactcgttgctcagtgtcctgctggggctggtcctgggcttc
ctcctcgcctccaggtttatcttgcccagagcggccgagctgcagagagccagccgtagg
agagcgggcggtgggggggtatcaggggggcaggctgggagctgtggccgacaatctgcc
ttaaggaacgattacagcggggtgctgggctggcaacagcggctacacacggacaccggg
gctctgagcccggccagcgaggaagacatccccacggacaagaacttcctttttgttggg
gtcatgacagctcagaagtacctggaaaccagagcagtggccgcttatgggacttgggca
aactccattcctggtaaagttgaatttttctccagtgaaggctcagatacatctatacca
attccaattgtgccactgcaaggtgtggatgactcctatccaccacagaagaagtccttc
atgatgctcaagtacatgcatgatcactacttggatcaatatgagtggtttatgcgagca
gatgatgatgtttacatcaaaggggatcgcttggagaactttttgaggagcctcaacagc
agcgaaccactgttccttggccagactggccttggcaccacagaggaaatgggcaaattg
gcactggagcccggagagaatttctgtatgggtggccctggtgtgatcatgagcagagaa
gtccttcgtagggtggtgccccacattggcgagtgtctaaggcagatgtttaccacccat
gaggatgtggagattggcagatgtgtcagaagatttgccggagtgcagtgtgtctggtcc
tatgagatgcagcagttgttctatgagaattatgaacagaacaagaagggctacatccga
gatcttcataacagcaaaattcacagagccatcactttacatcccaataaaaaccctccc
taccagtaccgcttgcacagctacatgctgagtcgcaaaatagcagagctccggtatcgt
acgatccagctgcaccgggagattgttcttatgagcaagtacagtaatgcagaaatccat
aaagatgatatgcaactggggattgctccatctttcatgcggttccaaccacgccaaaga
gaggagattctggagtgggaatttctcactggcaagtatctgtattcaactgctgatgga
caacctcctagacgaggaatggattcttcccaaaaggaggctcttgatgacattgtaatg
caagttatggagatgataaatgccaatgccaaggttcgaggtcgtattattgactttaaa
gaaatccagtacggataccgtagagttaatccaatgtatggtgcagaatatgtcttggat
ctgcttcttctctacaaaaagcacaagggtaagaaaatgactgttcctgtcaggagacat
gcctacctccaacagacattcagcaaaattcagttcatggaacatgaggagattgatgct
aaagcgctggcgaataaaataaatcaggaatctggttccttctactttttgtcaaattct
cttaagatgtttgttccctttcatctcactgcatcgaagactgaacataaagagcccaaa
gaaaccaaggtgaacatcctggttcccctctctggccgatttgatatgtttgccaggttt
atggccaactttgagaaaacctgcctcatcccaaatcaaaatgtgaagttagtcattcta
cttttcaattctgactccaatcctgacaaaaccaggcaagttgaactcatgagagattac
cgtgttaaatatcccaaagcagatatgcagatcttaccagtgtctggagagttctccagg
gctttggctttagaagttggatcctcgcagtttcgaaatgactctctgctcttcttttgt
gatgtggatttagttttctccactgagtttatacaacgatgcagggcaaacaccatttta
gggcagcaaatatactttccaattatatttagccaatatgaccccaagattgtttatgct
ggaaaagtccccagtgataaccattatgcttttactcagaagactggattttggagaaac
tatggctttggcatcacctgtgtttataagggagatcttttacgtgctggtggctttgat
gtttccattcaaggatggggactagaggatgttgaccttttcaacaaagtggtacaagta
ggtttaaagacctttaggagtcaggaggttggagtcgttcacatccaccatccggtgttc
tgtgacccaaatctcgatcctaaacagtacaaaatgtgtttgggttccaaagcctctaca
tatgggtcaactcagcgcctggctgagttatggcttgagaagaatgacccaatgtttggc
agaaccactcacacaaatgaatctgtgaggacagcctaa
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