Xenopus tropicalis (tropical clawed frog): 100036716
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Entry
100036716 CDS
T01011
Symbol
nid2
Name
(RefSeq) nidogen-2 precursor
KO
K06826
nidogen (entactin)
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100036716 (nid2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100036716 (nid2)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
100036716 (nid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
G2F
NIDO
Ldl_recept_b
EGF_3
cEGF
EGF_CA
EGF
FXa_inhibition
Plasmod_Pvs28
hEGF
MobA_MobL
Motif
Other DBs
NCBI-GeneID:
100036716
NCBI-ProteinID:
NP_001090732
Xenbase:
XB-GENE-967329
UniProt:
A1L1D2
LinkDB
All DBs
Position
8:95775801..95821586
Genome browser
AA seq
1520 aa
AA seq
DB search
MWDRTLHLLLPLHCLLAFSAAISRHELFPYGELRGDVLLQEGDDETSEVVKLSQPLLFYE
AQFSNLYVGTNGIISTQDFPRETQYVDDGFPTDFPVISPFLSDIDTSNGKGKIFYRQDNS
EQVLNRAVSEIQRGFPETSFVPTDAFLVTWENVGAYEEMTRLSPSSDRRNTFQAVLAYDH
SDAYAIFLYPEDGLQFFGTRPKESYNVHIELPARVGFSRSESGPYYSVTSNEQSVKNLYQ
TGNTGVPGIWVFHIGSIWELDNVIPAKFFGAPTKEQSLENSHTGFPEHRIFEKNESEDSI
DYPESFYEENEDDLEDNTSDATPTHNAHQKVDSDTGNQGYLDIDQASKLTHADVEQEATS
SVVLSSSHQNPDWTPYKLSESDTDRDGPLQEPQVQTGEDTDLTRGDTLLTEELPSHKAHN
LTPQNSEDLSIYPESEVLVGSHPEQENDFERKQIDADPGLQTDVFSFNPVGKETCERNHG
RCSRFAFCADYSAGFCCHCQEDYYGNGVHCLPRGAPHRVNGKVSGNILVGQTPVNFIAAD
LHAYIVANDGRAYTAISHVPDPASWSLTPLAPIGGLFGWLFALEKPGFQNGFSFTGAKFV
HNIDVTFYPGEETVHITQTADGFDSEGYMNVKTAIQGKIPYIPETSTIKLSPYTELYQYS
GSVVTSTAYREYTVISESNEEQKLSYRLRQNVTYQECSHSQKQPVSAQKLYVDRVFALYN
KEEKVLRYAVTNYIGSLHDSTGQDDLTVNPCYDGTHLCDTRAKCQPGSGLEYSCVCASGY
QGDGRDCTDVNECEVGFTRCGQNTVCVNLQGSYRCECASGFTLSGDGHNCILASLINPCE
DGSHTCNRDTSRCVPRGDGVFTCECFPGFNKSGEDCVDVDECTEHRCHPDASCTNTLGSF
SCRCNSGYEGDGFQCTQILGPEPLKTPCLEKRQQLHPRGPRPAVGQFVPECDVEGNYVPL
QCHGSTGHCWCVDKLGEEIAGTRTPPGRPAPNCGETGPEPLKTPCLEKRQQLHPRGPRPA
VGQFVPECDVEGNYVPLQCHGSTGHCWCVDKLGEEIAGTRTPPGRPAPNCGETGPEPLKT
PCLERRQQLLGQLHPRGPRPAVGQFVPECDAEGNYVSLQCHGSTGHCWCVDKLGEEIAGT
RTPPGRPGPNCGETEPTQRPQTVCERWKQSLIEHYGGKPGGEHYVPQCDQYGDFSPLQCH
GNSGYCWCVDKEGREIEGSRTEPGMTPACIPTVAPPTMHPTPRPDVTPPATGTFLLYAQG
QQIGYLPLNGTRLHKEKARTLLSLHGSIVVGIDYDCHEKMVYWTDVAGRTINRASLEPGA
EPETIINTGLMSTEGLAIDYLRRTMFWTDSGLDKIESARLDGTERKVLFDTQLVNPRAIT
VDAVRGNLYWTDWNREAPKIESSFVDGSNRRILVNDNIGLPNGLTFDPFSKQVCWADAGT
KKLECILSDGTGRRVIQSNLNYPFSVVVYANYFYHTDWRRDGVISLNKDTGHIVEEYLPE
QRSHLYGVTAVYPYCPSGRK
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacagaactctgcatctgctcctgcccttgcactgcctgctggccttctctgct
gctatatcccggcatgaactcttcccctatggggaactgaggggagatgtgctcctgcag
gagggggacgatgagacttctgaggtggtgaaactctcccaaccgctgctcttctatgaa
gcccaattcagcaatttatatgtagggaccaatggaattatttctactcaggacttcccc
agagaaactcagtatgtggatgatggcttccctacagacttccctgtcatttctccattc
ctctcagatatagataccagcaatggcaaaggaaagattttttatcggcaggacaattct
gaacaagttctcaatcgggcagtcagtgagatccagaggggtttcccagagacttcattt
gttcctactgatgccttccttgtgacttgggaaaatgttggtgcctacgaagagatgacc
cgtctctctccatcgtccgataggagaaacacgttccaggcggtactagcatatgatcac
tctgatgcttacgctatattcctttatcctgaagatggactccagttttttggtactcgt
cctaaggaatcctacaatgtgcacattgagctgcctgccagagtgggctttagccgatca
gaatcgggaccatactacagtgtaacaagtaatgagcaatccgtgaagaatttgtatcaa
actggcaacactggtgtcccagggatttgggtctttcacattggcagcatttgggaatta
gacaatgtaattccagcaaaattctttggtgctcccacaaaggaacaatcgcttgaaaat
tcacatacaggtttcccagaacacagaatatttgaaaagaatgaaagtgaagacagtatt
gattacccagagtccttttatgaggagaatgaagatgatctggaagataatacaagtgat
gccacaccaacacataatgcacaccaaaaagttgattcagacactggaaatcagggatac
ttggacatagatcaggcttccaaactgacccatgcagatgttgaacaggaagctacatca
tctgttgtgctttcctcttcacatcagaatcctgattggacaccctacaaactcagtgaa
tctgatactgacagagatgggccattgcaggaacctcaagttcagacaggggaggataca
gatttgacaaggggagacacattactgactgaagagctgccatcccataaagcacataat
ttaacacctcaaaattctgaagatctctcaatatatcctgaaagtgaagttctcgtgggc
agtcacccagaacaggaaaatgattttgaaagaaagcagattgatgctgatcctggactc
caaactgatgtgttttcctttaaccctgtgggcaaggagacatgtgagaggaaccacggg
agatgttctaggtttgctttttgtgccgattactctgctggcttctgctgtcattgccag
gaagattattatggcaacggagtacattgtttgccaagaggggctccacaccgtgtgaat
ggtaaagtgagcggaaacatcctggtcggtcaaacacctgtcaacttcattgctgccgat
ttacacgcatacattgtggcaaatgatggaagagcgtacacagcaatcagccacgttcct
gatcctgcatcctggtctttaacacctcttgctccaattgggggactctttggctggctt
tttgctttggaaaaaccaggctttcaaaatggttttagctttaccggtgccaagtttgta
cacaacattgatgtcacattttacccgggagaagaaactgttcatattactcaaacagca
gatggctttgattctgagggttatatgaatgtaaagacagcaattcagggcaaaattcca
tatatcccagagacatcgaccatcaagctgtctccttatactgaactgtatcaatactct
ggctcagttgtaacttcgacagcctacagggaatacacagtcatctcagaatcaaacgaa
gaacaaaaactgtcttaccggttacggcaaaatgtcacttaccaagagtgcagccattcc
cagaaacagcctgttagtgctcaaaagctttatgttgatcgtgtctttgccctttacaat
aaagaagagaaggtccttcgttatgcagttacaaactacattggatctctgcatgattcg
actggacaggacgatctcacagttaacccgtgctatgatggtacccacttgtgtgacaca
agagctaaatgccagcctggtagtggtctagaatacagttgtgtttgtgcgtctggatac
caaggggatggaagagattgcactgatgtaaatgaatgtgaagttggcttcacccggtgc
ggccagaacactgtttgtgtcaacctccaggggagttaccgttgtgagtgcgccagtggt
ttcactttatctggagacgggcacaactgcatcttggcttcactaataaacccatgtgaa
gatggaagtcatacatgtaacagagacacatcacgctgtgttccgcgtggagatggtgta
ttcacatgtgaatgtttccctggatttaacaagagtggagaagactgtgttgatgttgat
gaatgcactgagcacagatgtcatccagatgcctcatgtaccaacaccctgggctctttc
tcctgtcggtgtaacagtggttatgaaggagatggcttccagtgcactcaaatcttaggt
cctgaacccctgaaaaccccctgtttagaaaagcgccagcagctacacccaaggggcccc
cgtccagctgtgggacagtttgtaccagagtgtgatgtagagggaaattatgttccatta
cagtgtcatggcagcactggccattgttggtgtgtggacaaattaggtgaagagattgct
ggaacaagaacaccaccgggcagaccagccccaaattgtggggaaacaggtcctgaaccc
ctgaaaaccccctgtttagaaaagcgccagcagctacacccaaggggcccccgtccagct
gtgggacagtttgtaccagagtgtgatgtagagggaaattatgttccattacagtgtcat
ggcagcactggccattgttggtgtgtggacaaattaggtgaagagattgctggaacaaga
acaccaccgggcagaccagccccaaattgtggggaaacaggtcctgaacccctgaaaacc
ccctgtttagaaaggcgccagcagctgcttggacagctacacccaagaggcccccgtcca
gctgtgggacagtttgtacctgagtgtgatgcagagggaaattatgtttcattacagtgt
catggcagcactggccattgttggtgtgtggacaaattaggtgaagagattgctggaaca
agaacaccacctggcagaccaggcccaaattgtggggaaacagagcctactcagagacct
cagacagtgtgtgagaggtggaagcagagtcttattgagcattatggtgggaaaccaggt
ggagaacattatgtgcctcagtgtgatcaatatggtgacttcagtcctctccagtgccat
ggaaacagtggctattgctggtgtgtggataaagaaggaagagaaattgaaggatctaga
acagaacctggaatgactccagcatgtataccgacagtggcacctccaaccatgcatcca
actccgcgtcctgatgtgacccctcctgcaactggcaccttcctcttgtatgctcagggt
cagcagattggctacttaccactcaacggcacaaggctccataaggaaaaagccaggaca
ctgctgtcacttcatggttctatagtggttggtattgactatgactgccatgagaaaatg
gtgtactggacggatgttgcaggtcgtacaatcaaccgcgcaagcttagaaccaggtgca
gaaccggaaactatcattaacacagggttgatgagcacagagggcttagccattgactac
cttcgcaggacaatgttttggacagatagcggcctagacaagattgagagtgcgcggttg
gacggcactgagaggaaggttctatttgacacacagcttgtgaatcctcgagccatcact
gtggatgcggttagagggaacctgtactggacagactggaacagagaggctccaaagatt
gaatcttcgtttgtagacggatcaaacaggaggattctggttaatgacaacatcggcctt
cccaacggtttaacctttgatcccttctccaaacaagtctgttgggctgatgcaggaacc
aagaagcttgaatgcattttgtcagacggaacagggcgacgggtcatacagagtaacttg
aattatccttttagtgttgttgtgtatgcaaattacttctaccacacagactggaggagg
gatggggtaatatcccttaacaaggacactgggcacattgttgaagaataccttcctgag
cagcgatcccatctctatggagtaacagctgtgtacccatactgcccttcagggagaaag
taa
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