Xenopus tropicalis (tropical clawed frog): 100036725
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Entry
100036725 CDS
T01011
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 precursor
KO
K22661
calsyntenin 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100036725 (clstn3)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Cadherin related
100036725 (clstn3)
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
100036725
NCBI-ProteinID:
NP_001090739
UniProt:
A1L1E1
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Position
7:9329744..9353708
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AA seq
927 aa
AA seq
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MQHRGLHLSALLLSALLHCAASNKGNKHKPWIEAQYQGIIMENDHTVLLNPPLFALDKDA
PLRYAGEICGFRIHGSGTPFEAVVLDRTTGEGLIRAKGPVDCEAQREHTFTIQAHDCGEG
PDGVNSKKSHKATVHVRVNDVNEFAPVFGERVFKASVTEGRMYERVLRVQAWDQDCSPQY
SQVCFYQILTPNVPFTIDNDGYIKNTQPLQASGEKLIRFTVTAYDCGKKRAVEDAEVEIQ
VKPTCKPSWKGWNKRIEYVPGSGSLALFPNIHLETCDEPVGNIQATVEIQTSHIAKGCDR
DNYSEKALRKLCGASPGDVDLMPPPSPIHNWTHSLPVQDTQDSSLVFWFNGSQSVEVAPS
HLPAGGRTADHLTLSFWLKHAGGSGGRAGKEEEVLLCNTVQNGDGSFSHYTLAVHGCRIS
FLYWSLLESARPVKFLWKLEQVCDVEWHHYALSLEFPTVSLYVDGVTYDPALIHDNGALP
PPRRQARLMIGGCWAEEKLSVKVDDNETTRVTGTFPGRFLRGYMSGLTLRLGPVDSREVI
ECLYSCKEGLQYTDFDSLGKGMKVHVNPAQSQLSLEGDDAHSFSRALQHVEYLNSLQFPT
PGVRPLKLQTIVKCPSDEGCLSVPDLEGYLVVLQPDAPQVQLSGSPRSAHPVSDFQGPVG
VPIFPDLKITCSVSHPISPNKQERAPRADMQSPDGIECSLEKCEVGVVGEDLNVEYESLS
VDVSSTWQRGLEMENSSRSLKITGVQSVAVYEDILRGLTYRTVARAALFARKFHVSCSEM
NGRYISNQLYTEVDVLHGIHAGSPNHVLSAQQFVHSAHQAPAELSGHTLANPNPSSVFPG
VAMVIIIVCIGFLALIVTLGLSRIHSVRQRDGNEGAELEAATQRDTFWEDSAMTITVNPM
ESLQSRGLVSAQKEPVSERREPNEESG
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccgaggccttcatctgtctgcgcttctcctcagcgctctgctgcactgtgct
gcttctaacaagggtaacaagcacaagccatggatagaggcgcagtaccaagggataatc
atggagaatgaccacactgtgttgcttaaccctcccctgtttgctctggacaaagatgcc
ccactgagatatgcaggtgagatttgtggattccggatccatggctctggtacccccttt
gaagctgtggttctagatcggacaacgggagaagggctgataagagccaagggccctgta
gactgcgaggcccagagggagcacaccttcactatccaagcacatgactgcggagagggg
cctgatggggtgaacagcaaaaaatctcacaaggccacagttcacgtgcgcgtgaatgat
gtcaatgaatttgccccggtgtttggagaacgggttttcaaagcctcagtcactgagggg
cgaatgtatgagcgggttctacgggtgcaagcttgggaccaggactgttctccccagtac
agccaagtctgcttctaccagatactcactcccaatgtgcccttcaccattgacaatgat
ggctacataaagaacacacagccactgcaggccagcggggagaagttgatccgatttaca
gtcacggcctacgactgcggcaagaagagagctgttgaggacgcagaagttgaaatacaa
gtcaaaccaacttgcaaaccgagctggaaaggctggaacaaacgcattgagtatgtgcct
ggttccggcagcttggccttgtttcccaacattcatttggagacgtgcgatgagccagtg
gggaacattcaggccactgtggaaatccagacaagccacattgccaagggctgtgaccga
gacaattactccgagaaggccctgcgcaagctttgcggagcatccccaggggacgtggac
cttatgccaccgcccagtcccatccataactggactcacagtctcccagttcaggacaca
caagacagcagccttgtcttttggtttaatggatcccaatccgtggaagttgcccccagt
cacctaccagcagggggcagaactgcggaccacctgactctctcgttctggttgaagcac
gccggggggagtgggggacgggcggggaaggaagaagaggtgcttctgtgtaacacggtg
cagaatggagatgggagcttctctcattatacactggctgtacatggctgccggatctcc
tttctctattggtctcttctggaaagtgcccgtcctgttaagttcctttggaaactggag
caggtgtgtgacgtagaatggcaccattacgctctcagtctggagttcccgacagtctct
ctgtatgtggatggagtgacctacgaccctgcgcttatccacgacaacggtgctctccct
cctcccaggcgccaggctcggctaatgatcggggggtgctgggcagaggagaaattgtcc
gttaaagtggacgacaacgagacaacgagagtgacaggcacattcccagggcgcttcctg
aggggctacatgtcgggcctaaccctgaggctggggcctgtggattcccgggaggtgatc
gagtgcctgtactcctgtaaggagggattgcagtatacggatttcgacagtctgggaaaa
ggaatgaaggttcacgtcaacccagcccagtcccagctgtccctggaaggggacgatgcc
cattcgtttagccgcgcgctacagcacgtagagtacctcaactcattgcagtttcccacc
ccaggagtgaggcctctcaaactgcagactatagtcaagtgccccagtgatgaaggctgt
ctctcagtgccagatttggaaggataccttgtagttttgcagcccgatgctccacaggtt
caactttctggctcgcctcgctctgcacaccccgtctctgacttccaggggccagtgggg
gtccccatattcccagacctgaagattacctgctcagtgtctcatcccatcagcccaaac
aagcaggagagagctcccagggctgatatgcagtctcctgatgggattgagtgctctcta
gaaaagtgtgaggttggcgtggtaggagaggacctgaacgtggagtatgaaagtctgtct
gtggatgtctcttctacatggcaacgtggccttgagatggagaacagctccaggagccta
aagatcacaggggtgcagagtgtggctgtgtatgaggatatcctgcgcggcttgacttac
cgaacagtggctagagcagctttatttgcccgcaaattccatgtgtcctgcagcgaaatg
aatgggaggtatatcagcaaccagctatatacagaggttgatgtgttacatggaatccac
gctgggtcccccaatcatgttctctccgcccagcaatttgtccatagtgcacaccaggcc
cctgcagagttatcaggccacacgctggccaatcccaaccccagctcggtcttcccaggc
gtggccatggtgataatcattgtgtgtattggcttcttggcactgattgtcacactgggc
ttgtcacggatacacagtgtgcggcaaagagatggcaatgagggggcagagctggaggca
gcgactcagagagatacgttctgggaagactcagccatgacgattactgttaacccaatg
gagtccttgcagtctcgtggcttggtatcagcacagaaggagcccgtatcagagcgaagg
gaaccaaatgaggaatccggttga
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