Xenopus tropicalis (tropical clawed frog): 100037844
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Entry
100037844 CDS
T01011
Symbol
cntnap1
Name
(RefSeq) contactin-associated protein 1 precursor
KO
K07379
contactin associated protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100037844 (cntnap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100037844 (cntnap1)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
100037844 (cntnap1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
F5_F8_type_C_2
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
100037844
NCBI-ProteinID:
NP_001090759
Xenbase:
XB-GENE-963972
UniProt:
A2RUV2
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All DBs
Position
10:complement(22276285..22338811)
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AA seq
1326 aa
AA seq
DB search
MLNLGGTRFVALLLTWAGILQLRHVCRSEWCYNDLISPLYFTSFDASSRYSIMYTSNFAR
LYGSSGWSPAPGDKLPWLQIDLKQKYKIMGVATQGTHNSYYDWVTKYVLLYGDRPDSWKP
FFQQGTNWTFFGNVNSSGVKEHRLYYPVKARYVRFVPVAWNPKGKIGLRVGLFGCPYRHD
VLSFDGDDLFSYKLKGKISRTLNDSISFNFKTLEKNGMLMHAEGSQGDYITLELQKARLI
FQMSLGNSPIHPVDSHTVVKLGSLLDDQHWHSVYIERQGRDLNITLDGETIRVKCKGDFD
QLDLDTEIFFAGIVYQEKSLSHKQNFRGCLENILFNGINIADLARRKKSSIAFVGKVRFS
CIEMPYVPVTFSGINNYLLVPGVPASPKMMVSFKFRTWDTVGLLLYSSFTGSLGSLEMAL
SEGQINVSISQPGMKKLVFAAGYRLNDGFWHSVSLVARENSAVVIIDEDEGAEFKVNYDF
QVGTGDTYYFGGCPKPAAGSGCYSNQTAFHGCMQMINVDGQPVDLHRMQLGLFGRFSEVM
FNVCAIADRCRPNPCEHGGRCYQSWDDFFCICDMTGYKGETCHKSLFKENCDAYRVSGKY
SGNYTIDPDGSGPMKPFYVHCDISEERAWTIVHHDRYYATRVTGSSPDQPFLGEVNYWNA
TWGEVSALANGSEYCEQRIEFSCYRSRLLNTPNGLPYSFWMGRNNERHFYWGGSSPGIQR
CGCGIDKSCADPKLFCNCDGDYTQWKYDKGLLKFRDHLPVTRVVVGDTNRTGSEAWFSVG
PLRCYGDRNTWNTVTFMKGASLLFPTFKPDTSIDISFYFKTTARSGTFLETSGNRCGFPL
RHTWDLRYETFWMDMWYRCRNFIRIELNSTTELAFIYDIGNGFENVTVKSPFKFNDNEWH
QVKAEMNVKLARLKVDLLPWSIRKFPLQTYLNMTYDQPLYVGTAEHKLKPFLGCLRALRM
NGVTLDLEGKANETLGLRTNCTGYCEKPRLECQNGGRCVERYSHYTCDCNGTGFEGPFCT
RDIGAYFEAGTWVRHSILSAAMVAAQEFANVAYLPLFVSNLTREEISFSFRTTTSPAVLL
YVSSFSSDYIAVLVRPDGTLQLNYKVGITPYVYQLNKRNMTDGRPHRVNITRENLTLYTQ
VDFYPLEKNQFYLWEDRKFDTPKALYLGRVVEIGIIDSEVQKFNTPGFTGCLADVRFNNI
TPVRDIFRPSNSAGIITVKGSLVESNCAAMPMQIVHIPYDMDPWYMGTVFPHVHDDGLAG
IIAFTVIFLFLIAIAALFLVYHYFHRYKGSYLTNEPKAIDAPSASKPGSTRKEQPLPQIE
EEEPKE
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatttagggggaacgcgttttgtcgccctgcttcttacttgggctgggatccta
cagctgcgacatgtgtgccgctcagaatggtgctacaacgatctgatttccccactttat
tttacatcttttgatgcttcctcaagatattccattatgtacacctctaattttgcacgg
ttatatggcagcagtgggtggtctccagcccctggggataaactgccctggcttcaaata
gatttaaagcagaaatataagatcatgggagtagctactcaagggacccacaattcttac
tatgactgggtaacaaagtatgttctgctgtatggggacagaccagacagctggaagccg
ttttttcagcaaggaactaactggacattctttggcaatgtcaattcatcaggggtaaaa
gaacatcgcctttattacccagtaaaagctcgatatgttcgcttcgtcccggtggcatgg
aacccaaagggaaagattggccttcgtgtaggtctgtttggttgcccataccggcatgac
gttttatcctttgatggagatgacctcttttcctacaagcttaaagggaagattagtcga
accttaaatgacagcatatcttttaacttcaaaactttggagaaaaatgggatgctaatg
catgcagaaggatcgcaaggagattacatcacgcttgagcttcaaaaggcccggttaata
ttccaaatgagtttgggcaacagtcctatacacccagtagacagccacacagtcgtaaag
ctaggaagcctgctagatgatcagcactggcattctgtgtatattgaacggcagggccgt
gaccttaatataactttggatggagaaactataagagttaaatgcaagggagactttgac
caactggacctggatactgagatattttttgctggaatcgtttatcaagaaaaaagcctc
tcccataagcagaactttagaggatgcctggaaaacattctcttcaatggcattaacatt
gctgacctggcacgaaggaaaaaatcctcaatagcctttgtggggaaagttagattctcc
tgtattgagatgccctacgtcccagtgactttttctggtatcaacaactaccttctggtt
ccgggtgtccctgcaagcccgaagatgatggtgagctttaaatttcgaacatgggacaca
gttggacttctgctttactctagttttactggttccttgggttctcttgaaatggcattg
agcgaaggtcagattaatgtgtcaatttcccagccgggcatgaagaaactagtatttgct
gctggataccgactgaatgatggtttctggcattcagtctcattggtggccagagagaac
tctgctgttgttatcatagatgaagatgaaggtgcagagttcaaggttaactatgatttt
caagtgggaacaggagacacctactactttgggggttgcccaaaacccgctgcaggatct
ggctgctactcaaaccagacggcgttccatgggtgcatgcagatgatcaatgttgatggg
cagccagtggatttacatcgcatgcagctggggttattcgggagattctccgaggtcatg
ttcaacgtttgcgccattgctgatagatgcagaccgaatccatgtgagcatggaggccgt
tgctaccagtcctgggatgacttcttctgcatctgtgacatgactgggtacaagggagag
acctgccacaagtccctcttcaaagaaaactgtgatgcctacagggttagtggtaaatat
tcgggcaattacactatagatccagatggcagtggaccaatgaaaccgttctatgttcac
tgcgacatatcagaggaacgagcgtggacgattgtgcatcatgatcgatactatgctacg
agagtcactggctccagcccggaccagccgttcttgggagaggtgaattattggaacgca
acttggggagaagtgtccgcactcgctaatggatctgaatactgcgagcagagaattgag
ttttcttgctacagatctaggctccttaatactccaaatgggctgccatacagtttctgg
atggggagaaataatgaaagacacttctactggggaggttcaagccctggaatccagaga
tgtggttgcggtattgacaagtcctgtgccgatccaaaacttttctgcaactgtgatggg
gattacacgcagtggaaatatgacaaagggctgctgaagtttcgtgaccatctaccagta
acacgagtagttgtgggggacacaaacaggaccggctctgaagcctggttttctgtgggg
ccattacgctgctatggagacagaaacacctggaacacagtgacatttatgaaaggagca
agccttctttttccaactttcaaaccagacaccagcattgatatctccttctacttcaag
actaccgcccgttctggcaccttcctagaaacatcaggaaacagatgtggctttcccttg
cggcatacatgggacttgagatatgagactttttggatggatatgtggtatagatgccgg
aattttattaggatcgagttgaactcaacaacagaactagcgttcatctacgatatcggc
aatggttttgaaaatgttactgtgaagtcaccctttaaattcaatgataatgaatggcac
caggtaaaggctgagatgaatgtcaagctggccaggctcaaggtggacctacttccatgg
tcaatccgcaagtttcctcttcagacctacctcaacatgacgtatgatcagcctctctat
gtaggcactgcagagcacaaattgaaaccgttccttggttgcctgcgcgcactgcgaatg
aatggcgtgactttggatttagagggtaaagccaatgaaacattaggtttgaggaccaac
tgcactgggtattgcgagaaaccacggttggagtgccagaatggaggccgatgtgtagaa
cgatacagtcattacacttgtgactgtaatgggactggttttgagggaccattctgtact
agagatataggggcatattttgaagcaggcacatgggttcgtcacagcattttgtcagca
gccatggtggctgcacaggagtttgccaatgtcgcatatctgcctctgtttgtgagcaac
cttacccgtgaggagatttcctttagttttagaaccacaacctcccctgctgttcttctc
tatgtcagctctttctcctctgattacatagctgtactcgtcaggcctgatggaacgttg
caactaaattacaaggttggtattaccccttatgtctaccagctgaacaaaaggaacatg
acagatggcagaccccacagagtcaatatcaccagagaaaacctcaccctttatacccag
gtggacttttacccattagagaagaatcagttctacctgtgggaggatcggaagttcgat
acaccaaaagctctttatctaggaagggtagtagagattggcatcatagattccgaagtg
cagaagtttaacacaccagggtttacaggatgtctggcagatgtgcgctttaacaatatt
acccccgttagggacattttcagaccatctaactcagcgggcatcatcacagtgaaaggt
tcccttgtggagtccaactgcgcagctatgcccatgcagattgtgcacatcccttatgat
atggacccgtggtacatgggtacagttttccctcatgtacacgatgatggtttagcaggg
ataattgcatttactgtgatcttcctgttcctcattgccatcgctgccctttttctggtt
taccattacttccatcgttacaaaggttcctacctgaccaatgagccaaaagccatagac
gctccaagcgcgtcaaagcctggttctacacggaaagaacaacccctgccacaaattgag
gaggaagagccaaaagaatag
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