Xenopus tropicalis (tropical clawed frog): 100038047
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Entry
100038047 CDS
T01011
Symbol
riok1
Name
(RefSeq) serine/threonine-protein kinase RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100038047 (riok1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xtr01001
]
100038047 (riok1)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
100038047 (riok1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100038047 (riok1)
Protein kinases [BR:
xtr01001
]
Serine/threonine kinases: Other
RIO family [OT]
100038047 (riok1)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Pre-40S particles
Kinases
100038047 (riok1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
Motif
Other DBs
NCBI-GeneID:
100038047
NCBI-ProteinID:
XP_002932721
Xenbase:
XB-GENE-492176
UniProt:
A0A6I8RB68
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Position
6:89095045..89122160
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AA seq
548 aa
AA seq
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MTSQMSDNEEMESYESFLMRKEQASMQEEGANKEDSEDEEQDEDDDWYWDRTDTNMKHYS
ATRSSNPQANRNDIQSGSSKTYTVSDKVLQKYENKINLGKLYISESVLNKVSEKSRQKES
DTYRVKDKSDRATVEQVLDPRTRMILFKMLTRGVISEINGCISTGKEANVYHAGTSSGDS
RAIKIYKTSILMFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAGIPC
PEPIMLRSHVLVMGFIGKNDMPAPLLKNAPLSDSKARELYLDIIQYMRRMYQDARLVHAD
LSEFNMLYHNGKVYIIDVSQSVEHDHPHALEFLRKDCSNINDFFVKYGVAVMTVRELFEF
ITDPSITMDNMDAYLEKVMEIAVDRTEEERSSQDKVDEEVFMKAYIPRTLNEVKNYERDV
DTMQKLKEEDMALNTQQDNILYQTVTGLKKDLSGAETVPALLQSSNLEGQLGSDSDDDDD
DDDDDSAKDSASDSDEEIHPKDQESQPATDKKERKKMVKEAQREKRKNKVPKHVKKRKER
VAKMKKGK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcaaatgtcagataatgaagaaatggaaagttatgaaagtttcctcatgaga
aaagaacaggcatcaatgcaggaggaaggagccaataaagaggatagtgaggatgaggag
caggatgaggatgatgattggtattgggatagaactgatacaaacatgaagcactattcg
gctacaagaagtagtaatccacaggctaacagaaatgacatacaaagtgggtcctctaaa
acctacactgtgtcagataaagttttacagaagtatgaaaataaaatcaacttgggtaag
ctttatatttctgaatctgttctcaataaagtcagtgaaaaatccaggcagaaggagtca
gatacgtaccgagttaaagataaatctgacagagcaacagtggagcaggtattggatcct
aggactcggatgattctttttaagatgctcacaagaggggtcatatcagaaatcaatggg
tgtatcagcactggcaaagaagcaaatgtgtaccatgcaggcacttcatctggagacagc
agagcaatcaaaatttacaagacatctattctgatgtttaaggatcgtgataaatatgtg
agtggggaattcagatttcgtcatggctactgcaaaggaaatccaaggaaaatggtgaaa
acatgggcagaaaaagaaatgaggaacttaataaggctgaacacagcagggatcccttgc
ccagagcctatcatgttgagaagccacgtgcttgttatgggatttattgggaaaaatgac
atgcctgcacctcttctgaaaaatgctccactatcagactccaaagctagagagctttac
ctagatattatacagtatatgaggagaatgtaccaagatgcaaggcttgtacatgctgat
ctcagtgagtttaacatgctctatcacaatggaaaggtgtatatcatcgatgtatctcaa
tcagttgaacacgatcatcctcatgccttggagttccttcgaaaggattgttctaatatt
aatgatttctttgtcaaatatggcgttgcagtaatgacggtgcgagaactgtttgagttt
ataacagacccatcaattactatggacaatatggatgcttacttggagaaggtaatggag
atagctgttgatcggacagaggaagagagatctagccaagataaggttgatgaagaagtg
tttatgaaggcatacattcctagaactctaaatgaggtaaaaaattatgagagagatgta
gatacaatgcagaagctgaaagaagaagacatggcccttaacacacaacaggataacatt
ctctaccagacagtgactggactgaagaaagacttgtcaggtgctgaaacggttccagcc
ttgcttcagagtagtaatcttgaagggcagctgggatcagactctgatgatgatgatgat
gatgatgatgatgatagtgctaaagattctgcatcagattcagatgaagaaatacatccc
aaagatcaggagtctcagccagcaacggacaaaaaggaaaggaaaaagatggttaaagaa
gcccagcgagagaaaaggaaaaacaaggttccaaagcatgtgaagaaaagaaaagagaga
gtagcaaagatgaagaaagggaaatag
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