Xenopus tropicalis (tropical clawed frog): 100038050
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Entry
100038050 CDS
T01011
Symbol
fgd4
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4 isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100038050 (fgd4)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
100038050 (fgd4)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
FYVE_2
PH_13
RHG20_PH
DUF4819
zf-RING_UBOX
PH_19
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
100038050
NCBI-ProteinID:
XP_031754365
Xenbase:
XB-GENE-493422
UniProt:
A0A803JF58
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Position
3:complement(4818088..4880090)
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AA seq
895 aa
AA seq
DB search
MMPGGEGESGPPQREALSGEPFRRVAIRRKSNPGPINASLLLSVHPEGENGQKTGSSVHC
PRVLPIWKPISSSTDRLVDQNEQEQRVRRKELSKSPSLQKPAVPPKPEILTTSPSPQKPQ
TPISRTFPRGRPKMEDVTSNSGEKPTKISDLISRFEGGSPGEIRKASPSNLSNGPNHKPR
SKVILQPFTEHPLLHRQGTNQDIIQEQPKVTANGMATVTKAESGRKNALATPTIQTPPPN
GTQSPPLGTPDVLPEPKTAPPLPPALPPNKAAIVERMVNGEGSEVAQKPPIMGQTNQGYE
ETEPPIESSPTGEALEDIGTINITIAEPTDFKETNEQKLHNIANELLETERAYVSRLELL
QTFHDALMKEAKQGSFPVEVLNKIFSNISSIQSFHGQFLLPELESRMKEWSISPKIGDIL
QKLAPFLKMYAEYVKNFDNAMETLRGWMEKSVQFKNVVEEIQREGKCGNLTLQHHMLGPV
QRIPRYEMLLKDYLRKLPADSLDRKDAEKALELISFAATHSNTAIRKMENLKKLLSIYEM
LGEEEDIVHPSNELIKEGQILKLAARNTSAQERYLFLLNNMLLYCVPKFSLVGTKYTLRT
KIGLEGMKVVETQNEDYPHTFQISGKERTLELQASSEQNKEEWIKALRDTIAEVQQKNET
FKIAIAKELEETPSEVSRAELGLRAPRWIRDNEVTMCMKCKEQFNALTRRRHHCRACGYV
VCWKCSDYKATLEYDSNKMNKVCKDCYKILRGSIDSEEKEKKRGILEIESAEVSGNSVIC
SFLQYNEKSKPWQKVWCVIPKNEALVLYMYGAAQDVKAQATIPLLGYTVDDAPRHVDLPH
SFRLTQSKSVHTFSADTEELKQKWLKMIKLAVIGETPEEPEETTPASEGQSEPSH
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgggggtgaaggggagagcggaccccctcaaagggaagccttgagcggagag
cctttcaggagggtggcaataaggagaaagtccaacccaggacctataaatgcctccctg
ctactgtctgtgcaccccgagggggagaatgggcagaaaacaggcagcagcgttcactgt
ccccgagttctccccatctggaaacccatctcgtccagcacagaccgactagtggatcag
aatgagcaggagcaaagggtgagaaggaaggagctcagcaaatccccttcgctacagaag
cccgcagttcccccaaagccggaaattctgaccacatctccgtctccgcaaaaaccccaa
actcccatcagccggacctttcccagggggcggccaaagatggaggacgtgacgtccaac
tcaggggaaaagccgacgaagatctcggatctcatcagtcgcttcgaaggcggcagccca
ggtgagatccggaaagcctccccgagcaacttgagcaatgggccgaaccacaagccaagg
tctaaggtgatcctgcagccgtttaccgagcacccactcctgcacaggcaaggaaccaac
caggacatcatccaggagcagcccaaagtcacagccaatgggatggccaccgttactaag
gcagaatccgggaggaaaaacgcactagccactcccaccatacagactccgccccctaat
ggcacacagagtcctcctttggggacaccggatgttctacctgagccaaaaactgcaccc
ccactaccacctgctttgccccctaacaaggccgccattgttgagaggatggtgaatgga
gaaggttctgaggtggcccaaaagccccccattatgggccaaaccaaccaaggctacgag
gagacagaacctcctatagagtcgagtccaaccggggaagccctggaagatatcggcacc
attaacatcaccattgccgagcccactgactttaaggagactaacgagcagaagcttcac
aacatcgctaacgagctcttagagacggagagggcctatgtcagccgcctggaacttctg
cagacgttccacgacgccctgatgaaggaggccaaacaaggatctttccccgtcgaagtg
ttaaataaaatattctccaacatctcgtcgatacaaagctttcacgggcagttcctgctg
ccggagttggagtctcggatgaaggagtggtccatcagcccaaagatcggggacattctg
cagaagctggcgcccttcctcaagatgtacgccgagtacgtgaaaaactttgacaacgcc
atggagacgctgagggggtggatggagaagagcgtgcagtttaagaacgtcgtggaagaa
attcagagagaggggaaatgcggcaatttaactctgcagcaccacatgttggggccggtc
caacggatccctcgctacgagatgctgctgaaggactatttgcgcaaactgcccgcagac
tcgctcgaccgcaaggatgccgaaaaggcgctggagctcatttcatttgccgccacgcac
tcaaacacggcgatccggaaaatggaaaatctgaagaagctgctgagcatctatgaaatg
ttgggggaagaggaagacattgtgcacccctctaacgagttaatcaaggaggggcaaatc
ctgaagctcgctgcccgaaacacctcggcccaagagcgttacctcttcttgctcaacaac
atgttgctttactgcgtgccgaaattcagcttggtcggcaccaagtacacgctccgcacc
aagatcggcctggaaggaatgaaggtggtcgagactcagaacgaggattatccgcacacg
ttccagatatcggggaaagaacggacgctggagctgcaggccagctccgagcagaacaaa
gaagagtggattaaagctctgcgggacaccattgcagaagtgcagcagaagaacgaaacc
tttaaaatcgcaatcgcaaaagaactggaggaaacgcccagcgaagtgtcaagagcggaa
ctcgggctgagggccccacgttggattcgggataacgaagtgacgatgtgtatgaagtgc
aaggagcagttcaatgcgctgacgcggcggaggcaccactgtcgggcttgtggctatgtg
gtttgctggaaatgttcagattacaaagccaccctggaatacgacagtaacaagatgaac
aaagtgtgtaaagattgttacaagatcctgcgggggagcatagacagcgaggagaaggag
aagaagaggggcatcctggagattgaatcggctgaagtctcggggaacagtgtaatttgc
agttttctccaatacaacgagaagtcgaagccctggcagaaggtttggtgcgttatcccc
aagaatgaggcgctggtgctgtatatgtacggggcggcccaggacgtgaaggcccaggcc
accatcccgctgttgggctacacggtggacgatgccccgcgccacgtggatttgccccac
agcttcaggctgacccagtccaagtcggtgcacacgttctcggcagacacggaggagctc
aagcagaaatggctgaagatgataaaactggcggtgattggggagacccctgaggaacca
gaggagaccaccccggcctcggagggacagtcggaaccttctcattag
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