Xenopus tropicalis (tropical clawed frog): 100038060
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Entry
100038060 CDS
T01011
Symbol
fga
Name
(RefSeq) fibrinogen alpha chain
KO
K03903
fibrinogen alpha chain
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100038060 (fga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100038060 (fga)
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
100038060 (fga)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100038060 (fga)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100038060 (fga)
Hyaluronan
Extracellular matrix or blood plasma proteins
100038060 (fga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
T2SSF
Motif
Other DBs
NCBI-GeneID:
100038060
NCBI-ProteinID:
XP_002933535
Xenbase:
XB-GENE-478771
UniProt:
F6SP35
LinkDB
All DBs
Position
1:54510727..54521750
Genome browser
AA seq
761 aa
AA seq
DB search
MIQRVALITLLLCFAGSVWSEEEGGIEAQGGSIRGPRIMEAKAESDCKQDKNWPICSDED
WGPKCPSGCRLQGLVDKTDKDFAKRVETIKQKLKDGESSHKSIDLKTKQTYQFLKDNLVQ
AQQSDGKYNQVSEDLRKKIEYLKLKVSNQVERIKALQKNIRDQVVEMKRLEVDIDIKIRA
CKGSCAKNTDYKVDHDSYNNIQKLLLQAETTDLNSQMNAIRVLKMRPIKDSPVDSRYRTL
ALGKDQEAEFPIFKDINQYAFVLEGTKDEVKGSSMGTSSVVFPSGSGKDVVFQGSKIYGD
DKSTQSGTVTGGDQSTKVITERTVSCTKTVKRRVVSTPEGPKEEITETYSGGPECEKLGK
LSTDDTFQGGSDGTRVIHISGGSSLGDISKIPSFEEFLSSSGKKTQTSQTSSSSSSSSKV
THDVFTDLGEDEFDDFSHTGLDSPSFTPLQKEGSSTITKTVVSSSSSSRGSSKDGTQFDI
KSMKSGPVFTDFGPIQHDNSEEDRPDFQARTVRKEMKLVGDYTGKDCDDIRQKHSSGAKS
GIFKIRPEGSTKVLSVYCDQDTQLGGWILIQQRQDGSVNFNRTWQDYKNGFGSVDAGGKG
EVWLGNENIHLLTQKDTILRIELEDWSGEKVYAEYNIQLGSEAEGFTLKVSQYEGTAGDA
LIEGSKEDGEYTSHINMKFSTYDRDSDKWEENCAEMYGGGWWYNNCQASNLNGIYYIGGQ
YDPRNNFPYEIENGVVWVPFKAADYSLKTVRMKMRPVETSG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgattcagagggtagccctaatcacattgctgctctgctttgcaggcagtgtatggtct
gaagaagaaggtggcattgaagcacaaggaggaagcatacgtggtcctagaataatggaa
gctaaagctgaatctgattgcaaacaagacaaaaactggccaatctgttcagatgaagac
tggggtcccaaatgtccttctgggtgcagacttcaaggattggttgataaaaccgataaa
gattttgccaagagagttgaaacaattaaacaaaaactaaaggatggagaaagcagtcac
aaaagtatagatctgaaaaccaagcaaacatatcagttcctcaaggataaccttgtacag
gcccagcaaagcgatggaaagtataatcaagtgtctgaagacctcagaaagaaaatcgaa
tatttgaagctgaaagtttccaatcaagtagagagaataaaagcacttcagaaaaacatc
agagatcaggtggtggaaatgaaacgtcttgaggtggatattgatataaaaatccgtgct
tgcaaaggatcttgtgcaaagaacactgactacaaagtggaccatgacagctacaacaac
atacagaaactacttttgcaagctgaaaccactgacttaaatagccaaatgaatgccata
cgagtgcttaaaatgaggcctattaaggactctcctgtagactctcgttatagaacactg
gcacttggcaaagaccaagaagcagagttcccaattttcaaagacattaatcaatatgca
tttgttttagaagggacaaaagacgaggtaaaaggctcatctatgggaacctcatctgtt
gtatttccttccggcagtgggaaagatgtagtatttcaaggttctaaaatttatggcgat
gacaaaagtacacagtcagggacagtgacagggggagatcagtcaaccaaagtcatcaca
gaaagaacagtttcatgcactaagacagttaagaggagggtagtatccacaccagagggc
cctaaagaagaaatcactgaaacatatagtggtggtccggagtgtgaaaaattaggaaaa
ttaagcacagatgacacttttcaaggagggtctgatggaactcgtgttatccacatttct
ggaggtagttctttaggggatatcagtaagattccttcctttgaagagtttttaagttca
tctgggaaaaaaacacaaaccagccaaaccagtagcagtagcagtagtagttctaaggta
actcatgatgttttcactgatttgggagaagatgaatttgatgactttagccatacagga
cttgattcacccagctttacacccctccaaaaagaaggctcgtcaaccattacaaagact
gtggtctccagcagcagcagcagcaggggaagcagtaaagatggcactcagtttgatatt
aaatctatgaagagtgggccagtgtttaccgactttggccctatccagcacgataatagt
gaagaggataggcctgatttccaggcccgcactgtgagaaaagaaatgaagttggttgga
gattacactgggaaagactgtgatgatatccgtcaaaaacacagttctggtgccaaaagt
ggcattttcaaaatcaggccagaaggatccactaaggtgctatcagtgtattgcgaccaa
gatacccagttgggaggatggatcttgattcaacagagacaagacggatcagtaaatttt
aacaggacctggcaagactacaagaatggatttggcagtgtggatgccggtggaaaagga
gaagtctggttgggcaatgaaaatattcatttacttacccaaaaggatacaattcttcga
attgagttagaggactggtcaggggagaaggtttatgccgaatacaatattcagctaggg
tcagaagcagagggctttactcttaaagtatctcagtatgaaggcacggctggagatgcc
ttgatagaaggatctaaagaggatggagagtacacatcccacattaacatgaaatttagc
acatatgatagggacagtgacaagtgggaggaaaattgtgcagaaatgtatggagggggg
tggtggtataataactgccaagcttcaaaccttaatggaatttattacataggaggtcaa
tatgacccaagaaataattttccttatgagattgaaaatggagttgtttgggtacctttc
aaagcagcagattattcccttaaaactgtcagaatgaaaatgagaccagttgaaacatca
ggttaa
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