Xenopus tropicalis (tropical clawed frog): 100038068
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Entry
100038068 CDS
T01011
Symbol
irx4
Name
(RefSeq) iroquois-class homeodomain protein irx-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100038068 (irx4)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100038068 (irx4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
100038068
NCBI-ProteinID:
NP_001263621
Xenbase:
XB-GENE-480570
UniProt:
A0A8J0QFZ3
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Position
6:complement(67206704..67215815)
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AA seq
496 aa
AA seq
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MSYPQFGYPYSSTPQFLMTTNSLSTCCESSGRSLSDSAAAASAQTPVYCPVYESRLLATA
RHELNSAAALGVYGSPYTSTQGYGNYVTYGADASAFYSLNAFESKDGTGSAHAGIPQTAA
YYPYEHTLSQYQYDRYGTMDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRPYDEEEEEEEEEDSQKATIKNE
KKIVDEEVAREDKALDLSDLEDFDAIESESSECELKQPFHHQPQDGHQLRQRDCVNDHCK
DVILKMPITPAANQELDRTKICHKPGVDQCEQDVLRGRQRGGESKACFQQQQILDSKPRI
WSLAHTATSLNQTEYPSCMLKHQGLSSPSSSSSSSAVSTPVCVIDRRQDSPVTSLRNWVD
GVFHDPLFRHSTLNQALTNTTVSWATTKGTLIDSGSLGRSVGNPTNAIKGQLPNIPHDTN
KEFIAFQKSGSKMFCS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcctcagtttggctacccatattcctccacacctcagttcttgatgaccacc
aattccctttcgacctgctgcgaatccagtggaagaagtctgtccgactcagccgcggca
gcttcagcccagaccccggtctattgcccagtgtacgagagcagattgttggcaactgcc
agacatgaactcaattctgctgcagctttgggtgtctatgggagcccttacaccagtacc
caaggatatggaaactatgttacctacggcgctgatgcctctgccttctattctttgaat
gcattcgagtcaaaagatggcacaggatctgcgcatgcgggaatcccccagactgctgct
tactacccctatgagcacacactcagccagtaccaatatgacaggtatggtaccatggat
gggagcacccgaagaaagaacgccactcgtgagaccaccagcaccctaaaagcctggctg
caggagcacaggaagaacccttaccccaccaagggggagaagatcatgctggccataatc
accaagatgaccctcacccaggtctcaacgtggtttgcaaacgctcggaggaggctaaag
aaggagaataagatgacctggcctccacgaaacaaatgctcagatgaaaagagaccttat
gatgaagaggaagaagaagaagaggaagaagattcccagaaggcaaccatcaaaaacgag
aaaaaaattgttgacgaggaagtggccagggaggacaaagccctagatctaagcgacctg
gaggactttgacgccattgagtctgaaagttctgagtgtgaactgaaacaacccttccat
caccagccccaagatgggcaccaattgaggcagagagattgtgtcaacgatcactgcaaa
gacgttattctgaagatgccaataactccagctgctaatcaagaactggataggacaaag
atctgccacaaacccggggttgaccaatgtgaacaagacgtactaagaggaagacaaaga
ggtggcgaatctaaagcttgctttcagcaacagcaaatcttggattccaaaccaagaata
tggtctctagcccacacagccacctcattaaatcaaactgagtacccatcttgcatgtta
aagcaccaaggcttgtcttctccttcttcatcttcatcctcttctgcagtctccacacca
gtttgtgtcattgacagacgtcaggattctccagttacaagccttagaaactgggttgat
ggtgtttttcatgatccattgtttagacacagtactttgaaccaggcactcaccaatact
acggtttcgtgggccacgaccaaaggaacactgattgactctggctccttgggacgttct
gttgggaatccaactaatgcgatcaagggacagctacctaatataccacatgacacaaat
aaggagtttattgcattccaaaagtctggaagcaagatgttctgttcctaa
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