Xenopus tropicalis (tropical clawed frog): 100038108
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Entry
100038108 CDS
T01011
Symbol
tuba1b
Name
(RefSeq) 1
KO
K07374
tubulin alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
xtr04210
Apoptosis
xtr04530
Tight junction
xtr04540
Gap junction
xtr04814
Motor proteins
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100038108 (tuba1b)
09143 Cell growth and death
04210 Apoptosis
100038108 (tuba1b)
09144 Cellular community - eukaryotes
04530 Tight junction
100038108 (tuba1b)
04540 Gap junction
100038108 (tuba1b)
09142 Cell motility
04814 Motor proteins
100038108 (tuba1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100038108 (tuba1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100038108 (tuba1b)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100038108 (tuba1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100038108 (tuba1b)
04147 Exosome [BR:
xtr04147
]
100038108 (tuba1b)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100038108 (tuba1b)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100038108 (tuba1b)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100038108 (tuba1b)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100038108 (tuba1b)
Exosomal proteins of other body fluids (saliva and urine)
100038108 (tuba1b)
Exosomal proteins of colorectal cancer cells
100038108 (tuba1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100038108
NCBI-ProteinID:
NP_001107705
Xenbase:
XB-GENE-490055
UniProt:
B0BMH2
LinkDB
All DBs
Position
2:complement(136559848..136564075)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatacacgttggccaggctggtgtgcagatcggcaatgcctgc
tgggaactgtattgtttggaacatggcatccaacctgatgggcagatgcccagtgacaag
accattggaggaggggacgactccttcaacacctttttcagtgaaactggagcaggaaag
catgtccccagagctgtgtttgttgacctggaacccactgtcattgatgaggtgcgcaca
ggaacataccgtcagctgttccacccagagcagttaattaccggaaaggaggatgctgcc
aataactatgcccgtggtcactatacaattggcaaagaaattattgatctagtactggac
agaatccgcaaactggctgaccagtgcacaggtctccagggtttcctggtcttccacagc
tttggtggtggtactggttctggattcacctccctgctgatggagcgtctctctgttgat
tatggaaagaagtctaaactagagttctccatctatccagctcctcaggtctccacagct
gtggttgagccctacaactctatcctcaccacccacaccaccctggagcactctgactgt
gctttcatggtagacaatgaggccatttatgacatctgtcgcaggaatctagatattgaa
cgcccaacctacaccaacctgaacaggctcattagtcagatagtgtcttctatcacagcc
tctctgaggtttgatggagccctgaatgtagatctcacagagttccagaccaacttggtg
ccctatccccgtattcacttccctcttgccacctatgcccctgtcatctctgcagagaaa
gcttatcacgagcagctttctgttgctgagatcacaaatgcctgctttgaaccagctaac
cagatggtgaaatgtgatccacgccacggtaaatacatggcttgttgcctgttgtaccgt
ggtgatgtggtacccaaagatgtcaatgcagctattgccaccattaaaacaaagcgaagc
atccagtttgtagactggtgcccaactggtttcaaagttggtatcaactatcagccccca
actgtggttccagggggagacctggccaaggtgcagcgtgctgtgtgtatgctgagcaat
accactgcaattgctgaggcctgggctcgtctggaccacaagtttgatctcatgtatgcc
aagcgtgccttcgtgcactggtatgtgggtgagggtatggaggagggtgagttctctgag
gcccgtgaagacatggctgccctggagaaggattatgaggaggttggtgtagactctgtg
gaaggagagggtgaagaggaaggagaagaatattaa
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