Xenopus tropicalis (tropical clawed frog): 100038121
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Entry
100038121 CDS
T01011
Symbol
cbx3
Name
(RefSeq) chromobox protein homolog 3
KO
K11586
chromobox protein 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100038121 (cbx3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100038121 (cbx3)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100038121 (cbx3)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100038121 (cbx3)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100038121 (cbx3)
Heterochromatin formation proteins
HP1 (heterochromatin protein 1)
100038121 (cbx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_shadow
Chromo
Mtf2_C
Motif
Other DBs
NCBI-GeneID:
100038121
NCBI-ProteinID:
NP_001116264
Xenbase:
XB-GENE-492315
UniProt:
B1H306
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All DBs
Position
6:41664480..41676004
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AA seq
174 aa
AA seq
DB search
MGKKQNGKGKKVEEAEPEEFVVEKVLDRRVVNGKVEYYLKWKGFTDSDNTWEPEENLDCP
ELIEAFLNSQKAGKEKPDSNKRKSVSDSESEDSKSKKKRETVDKPRGFARGLDPERIIGA
TDSSGELMFLMKWKDSDEADLVPAKEANVKCPQVVIAFYEERLTWHSCPEDEAQ
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacagaatggcaagggcaagaaagtggaggaagcagagcctgaagaattt
gttgtagaaaaagttctggacagacgtgtagtaaatggaaaggttgaatattatctcaaa
tggaaaggtttcacagattcagacaacacatgggaacctgaagaaaacttagactgtcca
gagttgattgaagcctttcttaattctcagaaagcaggaaaagaaaaaccagacagcaac
aaaagaaaatctgtgtcagatagtgaatctgaagatagtaaatcaaagaaaaaaagggaa
actgttgataaaccacggggctttgcaagaggtctggatccagagagaataattggagct
acagacagcagtggtgaattaatgtttcttatgaaatggaaagattcagatgaagcagat
ctggtgcctgctaaagaagcaaatgtaaagtgtcctcaggtcgttattgcattttatgaa
gaaagattaacttggcattcttgtccagaggatgaagcacaataa
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