Xenopus tropicalis (tropical clawed frog): 100038149
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Entry
100038149 CDS
T01011
Symbol
macroh2a1
Name
(RefSeq) macroH2A.1 histone
KO
K11251
histone H2A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082
ATP-dependent chromatin remodeling
xtr04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100038149 (macroh2a1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100038149 (macroh2a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100038149 (macroh2a1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100038149 (macroh2a1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
100038149 (macroh2a1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100038149 (macroh2a1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Clp_N
DUF1764
YihI
DLIC
Motif
Other DBs
NCBI-GeneID:
100038149
NCBI-ProteinID:
NP_001090829
Xenbase:
XB-GENE-855803
UniProt:
Q5FWR2
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All DBs
Position
3:25563836..25600009
Genome browser
AA seq
369 aa
AA seq
DB search
MSSRGGKKKTTKTTRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKSRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKSKTTSPKKTLAKKPGAKKGVRKSKKKQGDVSKSASADSTTDGTPS
DGFTVLSTKSLFLGQKLQVVKADIATIDSDAVVHPTSSDLYTGGEVGNALEKKGGKEFVE
AVTELKKKNGPLDIAGAAVSSGHGLPAKFVIHCNSPSWGSDKCEELLEKTVKNCLALADE
KKIKSIAFPSIGSGRNGFPKQTAAQLILKAISNYFVSTMSSSIKTVYFVLFDSESIGIYV
QEMAKLDTN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtagagggggtaaaaagaagacaacaaagaccacgcggtctgcaaaggccggg
gttatatttccagttgggagaatgctgcgttacataaagaaagggcacccaaaatacaga
attggagttggtgcaccagtatatatggcagctgtactggaatatctaactgcggaaatt
ttggaattggctggaaatgcagcgagagacaacaaaaagagtcgagtaacaccacgacat
atacttcttgcagtagcgaatgatgaagaattaaatcagctattgaaaggggtcacaata
gcaagtggtggtgttttacctaatattcatccagaactcctggcaaagaaacgtggatcc
aaaggaaagctggaagccatcattactccaccaccagctaaaaagtcaaagacaacatca
cctaaaaagacattggcaaagaaacctggagccaagaaaggagttagaaaatctaagaaa
aaacagggagacgtcagcaaatcagcaagtgcagatagcacaacagatggcacaccttct
gatggattcactgttctttccaccaaaagtcttttcctcggacagaagttgcaagttgta
aaggctgacattgccaccattgacagtgatgctgtcgttcacccgacaagctctgatctc
tacaccggtggtgaagtaggtaatgccttagagaagaaaggtggcaaagagtttgtggaa
gctgttactgaactgaagaaaaaaaatgggccccttgatatcgctggagctgcagtaagc
tcaggccatggcttgcctgccaagtttgttatccactgcaatagtcccagctggggttca
gacaagtgtgaagagctgctggagaagacagtaaagaactgcttggctttggcggatgag
aagaagatcaaatccattgctttcccatcgattggcagtggaagaaatggtttcccaaag
cagacagcagcccaactcattctgaaagctatttccaactattttgtgtcgacaatgtct
tcttcaatcaagactgtgtactttgtgctttttgatagtgaaagcataggcatatatgtg
caagaaatggcaaaactagacactaattaa
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