Xenopus tropicalis (tropical clawed frog): 100038160
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Entry
100038160 CDS
T01011
Symbol
stab2
Name
(RefSeq) stabilin-2 isoform X1
KO
K19013
stabilin-2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100038160 (stab2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
100038160 (stab2)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Hyaluronan
Cell surface receptors
100038160 (stab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
EGF_TEN
EGF
EGF_MSP1_1
EGF_Teneurin
cEGF
Plasmod_Pvs28
FXa_inhibition
EGF_laminin
EGF_CA
Motif
Other DBs
NCBI-GeneID:
100038160
NCBI-ProteinID:
XP_012815318
Xenbase:
XB-GENE-491156
UniProt:
F6QGU9
LinkDB
All DBs
Position
3:complement(49362023..49550535)
Genome browser
AA seq
2560 aa
AA seq
DB search
MEKRTSLLFTVVLLCLVGLCKGDSENKAKRRCDKKTFISSKTLCMSCALNYKTNCTEGAK
KITSGSGLRDCRYFLDLNSYTLSLPGCRHMCLTETVEPLCCQGYWGPDCNDCPGGASSVC
NNRGTCSDGIQGNGSCTCQEHFGGTACETCSGNNLYGADCNKVCDCVHGVCKSGISGDGT
CSCYSGYDGPKCDQPLKECAALQCRENTRCVNSSTGALECRCMPDYEEKGDKCEPINPCS
QRICHEAAECIYLGPNRHRCSCNIGYKGDGAVCLPIDPCQENFGNCPTDTSICKYDGPGR
SHCECKEGYINFQPGLGCQLIDVCTVKNPCSKNANCTTIAPGQTECVCKKGYIGDGTVCY
GNILERMKELNTLPGQWQGKLSIAISLFEVYSWPLSTLGPFTVLVPINKGIRGKNVKNLI
TDKENTLYFIKLHIIAGQWSSELFNTTDLIYTLTGKSGEITSGEVDDEIKIRIHGSKKKG
KILQKNIIASNGILHIIDRAMDYVEPTLESNPKETIMSILQVNGRYNRFKLLLEKANLGP
DLEKDGPFTVFVPNNEALSAMENGTLDYLLSSEGSRKLLELMRYHIVQSAQLDVANIISA
THIMSMANQLIQFNTTKKGQILVNGEEVEEADVAAKNGRIYTLDGVLIPPSILPILPHRC
DESKYETQLGSCVSCSSVLFLSSCPLGTEPLNIFTQKCKYRNTIMGNDYERHGCSRYCNV
TVKVPTCCKGFYGRDCRPCPGGFINPCSRNGECMDGWNGNGTCICDIGFNGADCRRCTDN
NKYGLRCDKKCLCVHGRCNNHVDSDGSCLPSSCASGYSGKLCDRKTIPCGPLVTFCHAHA
DCEYSDGTPRCVCKSGYEGDGTYCREANPCISSDREICNVNADCLPVGPVNHKCVCRAGW
TGDGLDCSEINNCLLDNKGGCHPNATCVYIGPGQSDCECNKGFRGDGIDCEPVNACLEKA
EKCHFLASCKKMATGFWECVCGEGYEGDGTICYGTAGEVVAALQEASEFYRWIYDETIKN
LLSQTSNVTVLVPSRQAFEIMRKEDKAYWMTKENVPPLLKYHILSGIYSVDSLKNLSSSD
LLATSLHSNFLKVSNENGTTSINGAKFMVGDIAAKNGFVHIIDKVLTPNQLMVGSDPDFM
TRLGQMPDYSIFRSYVIEYQLAKEVEAADSYTIFAPHNDAINSYIRSKSPVTVDEDTVRY
HIVLGQKLLKDDLHNGMHRETLLGFSYQLGFFIHGEQLYINDAPVNNTNIYTDKGVIHGV
GKVLEIQKNRCDLNDTSLALSKCGECLTTPACPPGTQPIASEKKSCIFTKYYFGKRFVYI
GCQVQCAKTIITRECCPGFYGQQCLSCPGKGGNPCFGNGVCMDSINGTGTCQCKDGYIGT
ACETCVKGKYGPRCDQECYCINGKCSEGINGDGSCNCDVGWRGVKCDTAITEDKCNKSCH
TSANCIVNADGIARCQCASGFQGDGTVCSAVNACASNNGGCSDNAECRTTTPGNRICVCK
WGYTGDGIVCIEVDPCATNNGGCHKFAECTKTGANQSACNCLQRYSGDGIKCDPINPCLQ
KNGGCSAFAVCNHTGPAERTCECKSDYIGDGIDCKGTIYQELPKNRDTSTFYNQLQLNQI
NDLSGPGPFTVFVPSTSAFNDESMIKEWTAKGVMEQVLLYHIVSCAQLTKDDLTSIATVT
SLQGDSLTFTYSQDSVLLNGNAKIISSDTIMTNGIVHIIDKVLVPKNMQNFNKEASKIVL
DSLTKVAETHGYSAFSKLLQDTDILTLINDPIHQPVTIFLPTDNALKSLPKEQNDFLYDS
QNKEKLLQIIKYHVIRDAKIYTTDLVRKGSIKTLQGTDLSVKCADKESYGDVLLDDRQCK
LVQRQLMFNGGIAYGIDCLLTPSSVGGRCDNMVTFELMGSCGRCSNVPKCPSGSKPKPDK
VKCTYNLSSRRTLDGCRYDCSMVVWMTKCCSGFFGRDCQGCPGGPETPCNNHGLCDDGHS
GTGECRCNPGFNGTACELCLPGRYGPDCKPCDCTEHGQCDGGSSGSGKCSCDSGWTGKRC
ETKLVLPPVCTPACSSNAVCKEKNMCQCKKFYEGDGRTCNVVNLCKQNNGGCDSNAKCSQ
SGVKVTCSCLKGYKGDGNVCAAIDPCADGFNGGCDEHAICTMTGPDKRKCECKDQYIGDG
LSCEVKKLPINRCLQDNGQCHADALCNDLHFQDSTVGVFHLRSSKGVYKYNYSEAMKACN
DETATIATYNQLSYAQQAGFHLCAAGWLDGVRVAYPTTYSNQNCGSGFVGIVDYGPRVNL
SETWDVFCYRVKDVSCICKPGYVGDGYTCNGNLLQVLTSFPSFSNFLTEILVYSNTSVKG
KEFFNYLTNLSVQATLFAPSNDGLNENQTLSGRDIEYHLANVSMFFFEDLSNGTTLQTRI
GHKLLISFDNDPASKITTDSMTPTRYVDGKPILQWDIIASNGIIHTIAEPLTAPPEPLAL
HAGHGAGIFFGIVLIVGLLALAVYYYKKFNRKDFQFQFQQFNEYDEKPIVSELDRPSNIA
NPMYESSTATSLPETSTEPSFHPFSDSDEQQLVSFGSRSK
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaggacaagcctattattcacagtggtattactttgtctcgttggtctttgc
aagggggactcggaaaataaggcaaaacgcagatgcgataagaaaactttcatttcgtcc
aaaacactatgcatgtcctgtgcattaaactacaaaacaaattgcactgagggggccaag
aaaatcaccagtggaagtggactaagggattgcagatactttctagatttaaacagttac
acactttctcttcctggctgccgacacatgtgcttaacagagacagtcgagcctctgtgc
tgtcagggatactggggaccagactgtaatgattgtcctggtggggcttcaagtgtctgt
aacaacagaggaacatgttcagatgggattcagggcaatggaagctgcacttgccaggaa
cactttggtggaacagcctgtgagacatgttctgggaataatttatatggtgcagactgt
aataaagtttgtgactgtgttcatggtgtctgtaagagtggcatcagtggggatggtaca
tgctcgtgttattctggctacgatggaccaaagtgtgatcagcccttaaaggaatgtgca
gccctgcaatgcagagagaatactcgctgtgtaaattccagcactggagccctagaatgc
agatgcatgccagactatgaagagaagggggataagtgtgaacccattaatccatgttct
caaagaatctgtcacgaggctgcagaatgtatatacttagggccaaatcgacacaggtgc
tcatgcaacattgggtacaaaggcgatggcgctgtttgtttaccaattgacccctgccaa
gaaaattttggaaactgtcctactgatacttctatttgcaaatatgatgggccaggaagg
tcccactgtgaatgtaaagaaggatacataaactttcagcctggattaggttgccaactc
atagatgtctgtacagtcaagaatccatgcagcaaaaatgctaattgcactacaattgca
ccaggacaaactgaatgtgtatgcaagaagggctatattggggatggcactgtatgctat
ggaaatatactggagcgcatgaaggagctcaatactttgccaggccaatggcaagggaaa
ctctcgatcgctatatctttgtttgaggtgtattcctggcctctgtctactctgggacct
ttcactgtactggtgcccataaacaagggtatccgagggaaaaatgtaaagaatctgata
actgataaagagaacacgctctactttattaagcttcatatcattgctggccaatggagc
agtgaattgttcaacaccacagatttaatttatacattgactgggaaatcaggggaaata
acttccggagaagtggatgatgaaattaaaataagaattcatggaagcaagaagaaaggg
aagatactgcagaaaaatataattgcatccaatgggatcctacatattattgatagggcc
atggattatgtggaaccgacactggagagcaacccaaaagagacaatcatgtcaattcta
caagtcaatggtagatataacagattcaagttacttctagagaaagcaaatttgggacca
gatttagaaaaggatggaccttttactgtgtttgttcccaataatgaagccctgtctgca
atggaaaatggtactctagattacttgctctccagtgagggatcaaggaaactcctggag
cttatgagataccacattgttcagtcagcacagttggatgttgcaaatattatctcagcc
acccacattatgagcatggccaaccaactcatccagtttaacacaaccaaaaaaggacag
atcctagtgaatggggaagaagtggaagaagcagatgttgcagccaaaaatggccgtatt
tacactctggatggagttcttatcccgccatctatactgcccattcttccacacagatgt
gatgagtctaaatatgaaactcagcttggatcatgtgtttcatgtagctctgtgctgttt
ctgagttcatgtccactgggaactgagccattaaatattttcactcaaaaatgcaagtac
aggaatactataatggggaatgactatgagagacatggatgctctaggtactgcaacgta
acagtgaaggttcccacgtgttgcaaaggtttctatggccgagactgcagaccatgtcct
ggtggttttattaacccatgttcaagaaatggagagtgtatggatggatggaacggaaat
ggaacatgtatttgtgatataggatttaacggagcagactgccgacgatgtacagacaac
aataaatatggacttcgatgtgacaaaaaatgtctgtgtgtccatggaagatgtaataac
catgtagacagtgatgggagctgcctgccttcatcctgcgcaagtggatactcgggaaaa
ttgtgtgacaggaagaccattccatgtgggcctttggttacattttgccatgcacatgct
gactgtgaatacagcgatgggacaccaagatgtgtgtgcaaatctggctatgaaggagat
ggtacatactgcagagaagcaaatccttgtataagttctgatagagagatatgcaatgtt
aatgctgattgccttccagtaggcccagttaatcacaagtgtgtgtgtcgcgctggttgg
actggtgatggactggactgctcagagatcaataactgcctgcttgataataaaggaggt
tgtcatcctaatgctacatgtgtatacattgggcctggccagagtgactgtgagtgtaac
aaaggttttcgaggtgatggcattgattgtgaaccagtaaatgcatgcttggaaaaggca
gagaagtgccactttttggcaagttgtaagaaaatggcaacaggtttctgggagtgtgtt
tgtggagaaggatatgaaggagatggtacaatatgctatgggactgcaggggaggtagta
gcagccctacaagaagcctctgaattttatagatggatctatgatgaaactataaagaac
ttgctttcccagacttcaaatgtcaccgtgcttgtcccctctcgacaagcttttgaaata
atgagaaaagaagacaaagcttattggatgacaaaagaaaatgtgcctcccttgctaaag
tatcatatactatctggcatctacagcgttgatagtttaaagaacctttcttcatctgac
cttctcgccacctctctgcacagtaactttctcaaagtttccaatgaaaatgggactaca
agtataaatggtgccaagttcatggtaggagatattgcagcaaagaatggatttgtgcat
ataattgacaaggtactgactcctaaccaacttatggttggatccgaccctgacttcatg
acccggttaggccagatgccagattattcaatctttcgaagttatgttattgaatatcag
ctggcaaaagaggtggaagctgcagattcctacactatttttgcacctcataatgatgcc
atcaacagttatattagaagcaagagtccggtcactgttgatgaagacacagtcagatac
catattgttcttgggcagaagcttctaaaggacgaccttcataatggcatgcatcgagaa
acattactgggattttcatatcagttgggcttctttattcatggtgaacagctttacatt
aatgatgcaccagtaaataatactaatatatatactgacaaaggagtcattcatggagtg
ggaaaggtcctggagatccagaagaacagatgcgacctcaatgacacttctcttgctttg
agcaaatgcggcgaatgtctaaccacaccggcctgtcccccaggtacccagccaattgcc
agtgaaaaaaagagctgcattttcacaaagtattattttggaaagagatttgtttatatc
ggatgccaagtacaatgtgccaaaacaatcattactagagagtgttgccctggcttctat
ggccagcagtgcctctcatgcccaggcaaaggaggaaacccttgttttgggaatggagtg
tgcatggatagcattaatggcacagggacatgccagtgcaaagatggctatattggtact
gcctgtgaaacctgcgtcaaaggaaaatatgggcctcgctgtgatcaagagtgttactgc
atcaatggaaaatgcagtgaagggatcaatggtgatggttcttgtaactgtgatgttggc
tggagaggcgttaaatgtgatacggcgatcacagaagacaaatgcaacaagtcctgccac
accagtgcaaactgtattgttaatgcagatggcattgcacgttgccagtgtgcatctggc
tttcagggagatggcacagtgtgttcagctgtgaacgcatgtgcatcaaacaatggtggc
tgctcagataatgccgaatgtcgaactacaacaccaggaaacagaatatgtgtctgcaaa
tgggggtacactggagatggaattgtgtgcattgaggttgacccttgtgctactaacaat
ggcggatgtcacaaatttgctgaatgtacaaagactggagcaaatcagtctgcctgtaac
tgtttacagcggtattctggggatggtataaagtgtgaccccattaatccatgcttacaa
aaaaatggcggctgcagtgcatttgctgtatgtaaccacactggcccagcagaaaggact
tgtgaatgtaaatccgattacattggagatggtattgactgcaaaggcacaatctatcag
gaacttccaaaaaacagagatacctccactttttacaaccagttacagttgaatcagatc
aacgacctctcgggaccaggcccctttactgtgtttgtacccagtaccagtgcatttaat
gatgagtctatgatcaaagaatggactgctaagggggtaatggaacaggtgctgttatat
cacattgtaagttgtgcccagctcactaaagatgatcttacatcaatagcaacggtcact
tctcttcaaggagattctcttacttttacatactcacaggattctgtgctgttaaatggt
aatgccaagatcatttcctcagatacaataatgacaaatggcattgtgcacatcattgac
aaagttcttgttccaaagaacatgcaaaatttcaataaagaagcatctaaaatagtacta
gacagtctgacaaaggttgcagaaacacatgggtacagtgcattcagcaaattgttacag
gatactgacattttaacactcatcaatgaccccattcaccagccagtcaccatttttttg
ccaactgacaatgcactgaaaagcctgccaaaagaacagaatgatttcctttatgatagc
caaaacaaagaaaagcttttgcagattattaagtatcacgtcatcagggatgcaaagatt
tatacaactgatctggtacgaaagggatcgataaaaacccttcaaggcacagaccttagt
gtaaaatgtgcagacaaggagtcttatggagatgtgttgctggatgaccgtcaatgcaag
cttgttcagcggcagcttatgtttaatggaggaattgcttatggcattgactgtttactc
actccttcaagtgttggtgggaggtgtgacaatatggttacctttgaacttatggggtcc
tgtggcaggtgttcaaatgtaccaaaatgtccgtcgggaagcaagccaaagcccgacaag
gtgaaatgtacatataatttgtcctcaagaagaacgttagatggatgccgctatgactgc
tctatggttgtctggatgactaagtgctgcagtggtttctttggccgagattgccaaggc
tgccctggtggacctgaaactccctgcaataaccatggattatgtgatgatgggcactcg
ggaactggagaatgcagatgcaatcctggatttaatgggactgcttgtgaactgtgcttg
cctggaagatacggccccgattgcaagccctgtgattgcactgagcatggacaatgtgac
ggtggctccagcggatctggaaaatgctcctgtgatagcggatggacagggaaacgctgt
gaaacaaaattagtcttgcctccagtctgcactccggcttgttccagtaatgctgtgtgc
aaggaaaaaaatatgtgtcagtgtaaaaagttctatgaaggggacggaaggacatgtaat
gtggtaaatttgtgcaagcagaacaatggtggttgtgacagcaatgcgaaatgttcccaa
agtggtgtgaaagtcacgtgcagttgtctgaagggatacaagggagatggaaacgtttgt
gcagcaattgacccctgtgccgatggattcaacggaggctgcgatgagcatgccatctgt
acaatgactggaccagacaaacgcaagtgtgagtgtaaggatcaatatattggcgatggg
ttgagttgtgaagtgaaaaagcttccaattaatcgctgcctgcaagacaacgggcaatgc
catgctgatgcattatgtaatgatctacacttccaagattccaccgtcggtgtgtttcat
ttgcgttcctccaaaggggtgtacaaatacaactacagcgaagccatgaaagcttgtaat
gatgagactgcaacaatagcaacctacaatcagctgtcatacgcacaacaggcgggattc
catctctgtgcagctggttggctggatggcgttagagtcgcatatcctaccacttattcc
aaccagaactgtggatcaggatttgttggaatagtagactatggaccccgtgtcaaccta
agtgagacctgggatgttttctgctacagagttaaagatgtgtcatgtatttgcaaacct
ggctatgtgggagatggctacacttgtaatggaaacctgctgcaagtcttgacatctttt
ccttccttttcaaatttccttacggaaattttggtgtactctaacacttcagtgaaaggg
aaagaatttttcaactacctcactaacttatcagtgcaagcgactctgtttgccccaagc
aatgatggacttaatgaaaatcagaccctgtctggacgcgatatagaatatcatctggca
aatgtcagcatgttcttctttgaggacctgagcaatggaacaactcttcaaaccagaata
ggccacaagttattaatttcttttgacaatgacccagccagcaaaataaccactgattcc
atgactccaacaagatatgtggatggaaaacctattttgcagtgggacattatcgcttcc
aatggaatcattcacacaattgctgaacctctaactgcgcctccagagccattagctctg
catgctggccatggagcaggaatattctttggcattgttctgatcgtcgggctcctggca
ctcgcagtatactattataagaagttcaacagaaaagatttccaattccagtttcagcag
tttaatgagtatgatgaaaaaccaattgtttcggagcttgacaggccctcaaatattgct
aatccgatgtatgaaagttccactgccacctcgctgccagagaccagcacagagccgagc
tttcatcccttttctgactccgatgaacaacagcttgtgagctttggcagccgttccaaa
tga
DBGET
integrated database retrieval system
