Xenopus tropicalis (tropical clawed frog): 100038208
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Entry
100038208 CDS
T01011
Symbol
irx1
Name
(RefSeq) iroquois-class homeodomain protein irx-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100038208 (irx1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100038208 (irx1)
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GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
100038208
NCBI-ProteinID:
NP_001188351
Xenbase:
XB-GENE-486817
UniProt:
Q6F2E3
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Position
6:68199522..68204629
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AA seq
467 aa
AA seq
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MSFPQLGYPQYLSAGQAAVYGGERPGVLAAAAAAAAAAAAAGSGRPTGADLGSSSTAAVT
SVLGMYASPYSAPNYSAFLPYTTDLTLFSQMGSQYELKDNPGVHPATFAAHTTPGYYPYG
QFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA
RRRLKKENKVTWGARSKEDDNIFGSDTEGDHEKNEDDEEIDLESIDIDKIDDNDGEQSNE
EEDEKLEHLRQGEKESFKKESEVMIPSSDGLKSKDSLSLGKESSDTSNTRIVSPGGQGNI
QVPPHNKPKIWSLAETATSPDGALKSSPPPSQANHTSPPIQHPAFLPSHGLYTCQIGKFH
NWTNGAFLTQSSLINMRSLLGVNPHHVAHHNHHHLQAHQQAPLLATNLSSLSSDKTPERT
SPKHSDRENLPRTESPPQLKPSFQAVRENTLSQQEGTSRILTALPSA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccctcagctgggctacccccagtacctgagcgctggccaggctgcagtctat
ggaggcgaacggccgggtgttttggccgcggcagcggcagcagcggccgcagcagcagca
gccggatccggaaggccgacaggagctgatctgggcagcagttctaccgcggcagtgacc
tcagtgctgggcatgtatgccagcccctacagcgctcccaactacagcgcctttctaccc
tacaccaccgatctcacccttttctcccaaatgggatcgcagtatgaactgaaagacaac
cccggtgtccacccagccacatttgctgcacacactactccaggctattacccctatgga
cagttccaatacggagacccagggcggcccaagaatgccaccagggagagcaccagtacc
ctaaaggcttggctcaatgagcacaggaagaacccttaccccaccaagggggagaagatc
atgctggccataatcaccaagatgaccctcacccaggtctcaacgtggtttgcaaacgct
cggaggaggctaaagaaggagaataaggtcacttggggggcaaggagtaaggaagatgac
aacatctttgggagtgatactgaaggagaccatgaaaaaaatgaagatgacgaggaaata
gatttggaaagcatagatattgataaaattgatgacaacgacggtgagcaaagcaatgag
gaagaggatgagaaactggagcacttgagacagggcgagaaagagagtttcaaaaaggag
agtgaagtgatgattccaagttccgacggacttaaatcaaaagactcattgtcccttggt
aaggaaagttctgataccagcaataccagaatagtaagccccggtgggcagggcaacata
caagtgccacctcacaataaaccaaaaatctggtccttggcagaaacagcaacaagtcca
gatggggccttgaagtcttctcctccaccttctcaagccaatcacacatctcccccaatt
cagcacccagcctttctccccagccatggactatacacatgccaaattggcaaatttcac
aactggacaaacggggcctttctcacacagagctccctgataaacatgaggtccttgctg
ggagtaaaccctcaccatgtggctcaccataaccaccatcaccttcaggctcaccaacaa
gctccattgttagcaacaaacctgagttccctcagcagcgacaaaactccagaacggacc
agccccaagcactcagacagagaaaacttacccagaaccgaatctccacctcagttaaaa
ccttccttccaagctgttcgtgaaaacaccctttcacagcaagaaggcacctctcgtata
ttgacagcacttccctctgcctga
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