Xenopus tropicalis (tropical clawed frog): 100038212
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Entry
100038212 CDS
T01011
Symbol
pax1
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100038212 (pax1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100038212 (pax1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
100038212
NCBI-ProteinID:
XP_002939483
Xenbase:
XB-GENE-487951
UniProt:
F6YT31
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All DBs
Position
5:complement(36054067..36065662)
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AA seq
357 aa
AA seq
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MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKHIREYKQSDPGIFAWEIRDRLLADNVCDKYNVPSV
SSISRILRNKIGNLSQPSQYDSPKQPASQPTYNHLYQYPYPNPISPGSTKVGSHHPGVHM
PTGHVSIARQWPSAHSVNNILGIRTFMEQSPIAGTEGSVYSPKMEDWASVNRSGFPGSQN
MNGLEKSVVEPDMKYPQSASGLSTVGSFVPGCVYPTTNQYGVYGGPGAGYVTPGHHWQTQ
GNPLGPSVTVHGGDIAAPVTFKHPVREVVNRKPNSPIIKIPETLSNIHGLPIPASSS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaacctacggcgaagtcaaccagctgggaggcgtgtttgtcaatggaagaccc
ctgcccaacgctatcaggctgcggatcgtggagctggcccagctgggcatcaggccgtgt
gatattagccggcaattgcgagtctctcatggatgtgtcagtaagatcctggcgaggtac
aacgagaccggctccatcttgcccggggcaattgggggcagcaagcccagagtcaccacc
cctaacgtggtgaagcacatcagggagtacaaacagagcgacccgggcatcttcgcttgg
gaaatcagagacagacttctggctgataatgtgtgcgacaagtacaatgtgccctctgtc
agctccatcagtaggatattaaggaataaaattggaaacctctctcagcccagtcagtat
gacagccccaagcaacccgcatcccaaccaacgtacaatcacctgtatcagtacccctac
cccaaccccatctctcctggctctaccaaggtgggcagccatcacccaggggtgcatatg
cctacgggacatgtcagcattgccaggcagtggccttcggctcattctgtcaacaacatt
ctgggaatccgcaccttcatggaacaaagccctattgccggcacagagggctctgtctat
tctccaaaaatggaagactgggccagtgtcaaccgatcgggctttcctggcagccagaat
atgaacggcctagagaaatctgtggtggagcctgatatgaaatacccgcagtccgcctca
ggtctctctacagtgggcagctttgtcccaggatgtgtgtaccctaccaccaaccagtat
ggggtgtatgggggcccaggagctgggtacgttaccccagggcaccactggcagacacaa
ggaaacccccttgggcccagcgtgacggtacatggaggagacattgcagccccagtgaca
ttcaaacacccagtgagggaagttgtgaacaggaaacccaacagccctatcataaaaatc
ccagagaccttgagtaatatacatggacttccaatccctgcttcatcctcttaa
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