Xenopus tropicalis (tropical clawed frog): 100038214
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Entry
100038214 CDS
T01011
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100038214 (btaf1)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100038214 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_2
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_EZ
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
100038214
NCBI-ProteinID:
XP_031762329
Xenbase:
XB-GENE-488495
UniProt:
A0A8J1JWQ9
LinkDB
All DBs
Position
7:complement(25848291..25895785)
Genome browser
AA seq
1846 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPATRLKKEPGLEGSNEESSHLERLSFDRFDISRLLKHGASLLG
SAGAEFEVQDDKTGEVDPKERIARQRKLLQRKLGLDMGAAIGMSTEELFNDEDLDYMPTT
ALLNKPAAEFIDSEFLPGMSNRQKNKAKRMAKLIAKQRSRDTIETNEKSSDSTDGEPEEK
RRKVTNVVINQPATESKVLIDNVPDNSSPYDEINEWPLESFSEELCNDLFNPSWEVRHGA
GTGLREILKAHGRSGGKIADCTLEEMKQQHQDWLEDLAIRLLCVFALDRFGDFVSDEVVA
PVRETCAQTLGVVLKHMNENGVHNTVKILLKLLNQEQWEVRHGGLLGIKYALAIRQDLIN
SLLPKALPAIVEGLQDLDDDVRAVAAASLVPVVDSLVKLQFKQVPFIMSTLWDALLELDD
LTASTNSIMTLLSSLLMYPQVQQCNVQQSLTILVPRVWPFLRHTISSVRKAALETLCTLL
STQDQNCSGWLTPILQDMMRHIFQICILESNQEIIDLIHKVWQELLNKASVQYVVAAACP
WMGAWLCLMMQPSHIPIDLHMLLEVKAKSKEKGGGKLRQCQSQTKEITQEYIAGSDSVNE
DSSTRDYVVIRARVAAAKLLGSLCCCICEPSINNLAQEIKPAESLAQLLLFHLNSKSALQ
RISVALVISEWAAMQKECRTVALAVQPRLLAVLSEHLYYDEIAIPFTRMQNECKQLISSL
AESQIDIRSKVNCSVFTINQANDLVTTVFSESTSALPVNSKQFQQLDAKRQQVQMTVMET
SQEWQVLQQRVHTFGACAVVNLQQLPEKLNPVIKPLMEAVKREENAVVQNCAAMCIAKLL
QQCTSRTPCPNPKIVKNLCSSLCIDPNITPTVTCPAPALNNVENSKGPGSEKDGMYHIFT
KHRGIITLYRHQQAAFAITSRRGPTPKASKSHVGDLPPGSGSCVNVADTDENQKQHHIQR
RGAEFTVSTIARHFACDLASGLPHLWEAMLGPLRNNISPDNFDGKLLLDKGDEAAQELVN
SLQVFEVTAASMDPGLHPVLLQHLSHLFTCLQHPYTAVRHMASRCIGILSRIATMETMNT
FMEKVLPWLGAINDNTKQEGAMEALACIMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRF
MATQCFATLIRLMPLEAGIPDPPSMSEELIKLKARERNFLEQLLDGKKLENYTIPVPIKA
ELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRSKEYSKNKSADC
MPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKKHNMVVASYD
VVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLSANYRIILSGTPIQNNVLELW
SLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRM
KEDVLQDLPPKIIQDYYCSLSPLQVQLYEDFAKSRAKTDIDETVSTTSLIEENEKPKVKA
TGHVFQALQYLRKLCNHPALVLTTQHPEYKKISEQLGVQNSSLRDIQHAPKLSALKQLLL
DCGLGNGGTAESGTEAVVAQHRILIFCQLKSMLDIVEQDLLKPHLPSVTYLRLDGTIPAG
QRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIG
QKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASLQSMGTDQLLDLFTLDKDG
KSEKADAAKESGKSSMKSILDGLGELWNQEQYDSEFSLDNFMHSLK
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccaggttggaccggctgttcattttgcttgacactggaacaacccctgtg
acaaggaaagcagcagcccagcagcttggagaagtagtcaaacttcatcctcatgaactc
aacaacttattatccaaagttttagtttacctgaggagtccaaactgggatacacgcatt
gctgcagggcaggccgtggaagcaattgtaaaaaatattcccgagtggaatccagccaca
aggttaaagaaagaaccggggctggaaggttcaaatgaggaatcttctcatttagagcgc
cttagttttgataggtttgacatttccagattattaaaacatggggcttctcttctgggc
tcagctggtgcagagtttgaagttcaagatgataaaacaggggaagttgatcctaaagaa
aggatagctcgacaaagaaagctgttacagagaaaactgggccttgatatgggagctgcg
ataggaatgagtactgaggagctctttaatgatgaagacttggattatatgccaactact
gcacttctaaataaacctgcagctgagttcatagactccgaattccttccagggatgagt
aaccggcaaaaaaacaaggctaaacgaatggcaaaattgattgcaaagcaacggtctaga
gatacaatagagacaaatgaaaaaagtagtgacagtacggatggggagccagaagagaaa
cgaagaaaagtgacaaacgtagtaatcaaccaacctgcaacagagtccaaagtgttaatt
gataatgtacctgataattcttcgccatatgatgagataaatgagtggccccttgaaagt
ttttctgaagaactttgtaatgatctatttaatccttcttgggaggtacgccatggtgct
ggcactggtctcagggaaatcctcaaagctcatggaagaagcggaggtaaaattgctgat
tgcacacttgaagagatgaaacagcaacatcaagactggcttgaggacttggctattcgt
ctcctatgtgtctttgcattagacagatttggggattttgtctctgacgaagtcgttgcc
cctgtacgggaaacttgtgctcagacgctgggggttgttctcaaacacatgaatgaaaat
ggcgtgcacaacacagttaaaattctactaaaactactaaatcaggaacagtgggaagtg
agacatggcggactactaggaataaagtatgctttagctattcggcaggatttaattaat
tctttattacctaaagcgctgccagcaatagttgaaggtctgcaggaccttgatgatgat
gtacgtgccgttgctgctgcctctttagtgcctgtcgtggatagccttgtcaaactgcag
tttaagcaggtacccttcataatgagcactctgtgggatgctctgctggagttagatgat
ctgacggcatccaccaatagcatcatgactctactctcttcacttttaatgtatcctcag
gttcagcaatgcaatgttcagcagtcacttacaatcttggttccaagagtatggcctttc
ttgcgacatacgatatcttctgttcgaaaagcagcactggaaactttatgcactttatta
tcaacacaggatcagaattgttcaggctggctgacccctatcttacaagatatgatgcgg
catatattccaaatctgtattttggaaagcaatcaagaaatcattgacctcatccacaag
gtatggcaggaattgctaaacaaggcatcagtgcagtatgtggttgcagctgcttgtccc
tggatgggagcctggttgtgtctaatgatgcagccttcccatatacctattgatttacac
atgctgttagaggttaaagcaaaatcaaaggaaaaaggaggtgggaaactgcgtcagtgt
caaagtcagacaaaggagattacccaggaatatattgctggatctgacagtgtgaatgag
gattcttctacaagggactatgttgtaataagagctcgggttgcagctgcaaagttgctg
ggatcattatgttgctgcatttgtgaaccaagtattaacaatcttgcccaagaaattaaa
cctgctgagtcgctggctcagcttctacttttccatttgaactccaagtctgccctgcag
cgaatcagcgttgctcttgttataagtgagtgggctgcaatgcaaaaggaatgcaggact
gtggcccttgctgttcagccgcggctgcttgctgtcctttctgaacacctctattatgat
gaaatagcaatcccttttacccgcatgcaaaacgagtgtaagcagcttatttcctcgctg
gccgaatcacaaattgacatcagaagcaaagtgaattgcagtgtatttacgataaaccaa
gccaatgatctggtcaccacagtcttcagtgagtctacatctgcccttcctgtgaattcc
aagcagtttcagcagctggatgccaaacgacagcaggttcagatgacagtcatggaaact
agccaggaatggcaagtcctacagcagagagtgcacacgtttggtgcctgcgctgttgtg
aaccttcagcagcttcccgaaaaactaaatccagtcatcaaacctctaatggaggctgtg
aaaagagaggagaatgcggttgttcagaattgtgcagctatgtgcatagcaaagctcctc
caacaatgcacatcaaggacgccatgccccaaccctaaaattgttaagaatctctgctct
tctttgtgcattgacccaaacattacccctactgtaacatgcccagcccctgccttgaac
aacgtggaaaattccaaaggaccaggttctgaaaaagacggaatgtatcacatattcacc
aagcacagaggaattattaccttgtacaggcatcagcaggctgcttttgcaatcaccagc
agacgggggccaactcctaaagcaagcaagtcccatgtaggagatctgccaccagggagt
ggtagctgtgtaaatgttgcagacactgatgagaatcaaaaacagcaccatatacagaga
agaggagcggaatttacagtgtctacaattgctaggcattttgcctgtgacttggcttct
ggcttgccacatctctgggaggctatgttaggccccctgaggaacaacatcagccctgac
aattttgatggaaagctcctacttgataaaggagatgaggcagctcaggaactggtgaac
agtcttcaagtttttgaggtcacagcagcttctatggatcctggacttcatccagtgctg
ttacagcacctgtcccatctcttcacgtgtctgcaacatccttacactgcagtgagacac
atggcttctcgatgcataggcatcttgagcaggatcgccacaatggaaactatgaacact
ttcatggaaaaagttctgccctggctcggcgcaattaatgataacaccaaacaagaggga
gccatggaggctctggcctgtattatggagcagcttgatgttggcattgtcccatacatt
gtgctccttgtagtgccagtgttgggaagaatgagtgaccaaacagacagtgtccgcttc
atggcaactcagtgcttcgcaacattaataagactcatgcctttagaggctgggattccg
gatccacccagtatgtcagaagagttaatcaaattaaaagccagggaacgtaacttcttg
gaacaactcctagacgggaaaaagttggaaaattatacaatccctgttccaataaaagca
gagctgaggaaataccaacaggatggagtgaattggttagcattcctaaacaaatacaaa
ttacatggaattctgtgtgatgatatgggtctgggcaagactctgcagtccatatgtatt
cttgctggggaccactgccagaggtctaaagaatattccaaaaataaatctgcggattgc
atgcctctgccttcgcttgttgtgtgtccaccaaccttgactggtcattgggtggatgaa
gtaggaaagttctgctctaaggagtatcttaatcccttgcactatactggacctcccact
gaaagagcgcgtttacagcaccaagttaaaaagcataatatggttgtagcttcctacgat
gttgtgaggaatgacatagacttcttcagaaatatcaagttcaattattgtattcttgat
gaaggtcatgtgatcaaaaatgggaaaacaaagttatctaaagctgtaaagcaactctca
gccaattacagaataatcctgtctggaacgccaattcaaaacaatgttttagaattgtgg
tcattgtttgacttccttatgcctggatttttgggtacagaacgtcaatttgcggcaaga
tatgggaaacctattttagcaagtagagatgctcgcagttcctcccgtgaacaggaagct
ggtgttcttgctatggaagctctgcatcgccaggttttgccatttttattgcgcagaatg
aaagaagatgtattacaagatctcccacccaaaataatacaagattattactgctccctg
agtcccttgcaggtgcagctttatgaagattttgcaaaatctcgtgccaagactgatatt
gatgaaactgtatccacaacttcattgatcgaggagaatgaaaagcccaaggtgaaggct
acaggacatgtgttccaggctctgcagtatttacgcaaactgtgcaatcatcccgcactg
gtcctgacgacgcagcatccagagtacaagaaaatatcggagcagcttggtgtgcagaac
tcctctctacgggatatccagcacgcacccaagctctctgctctcaaacagctgctactg
gactgtggcctgggcaatggtggcactgccgagagtggcacggaggcagttgtggcacaa
cacagaatactgatcttttgccagctgaaaagcatgctggatattgtggaacaagatcta
ctgaaacctcatttaccttcggtcacgtatctacggctggatggaaccataccggcaggg
caaagacattccatagtgtcaaggttcaataatgacccatctattgatgttcttctactt
accacacatgttggtgggctgggtctcaacctaactggggctgatactgtagtctttgtg
gagcatgactggaatccaatgagggaccttcaggctatggatcgtgcccaccgtattgga
cagaaacgtgtggtcaatgtgtacaggctcataacaagaggaacgctggaagaaaagatt
atgggactgcaaaagttcaaaatgagtattgccaacactgtgataagccaggaaaatgcc
agcttgcagagcatgggcaccgaccagctcctggacttatttacgctggataaggacgga
aaaagtgaaaaggctgatgctgccaaagagagcggcaagagctccatgaagtccattctg
gacgggctgggggagctgtggaaccaggagcagtacgactcggagttcagcctcgacaac
tttatgcattctctgaaataa
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