Xenopus tropicalis (tropical clawed frog): 100038256
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Entry
100038256 CDS
T01011
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100038256 (tfip11)
Spliceosome [BR:
xtr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100038256 (tfip11)
Other components
Complex C specific factors
100038256 (tfip11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
100038256
NCBI-ProteinID:
NP_001090845
Xenbase:
XB-GENE-984521
UniProt:
Q0IIX9
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Position
4:15109205..15119844
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AA seq
825 aa
AA seq
DB search
MSMSHLYGKDEDSDGVEMENFEITDWDLQNEFNPNRRKHFQTKEEATYGMWAERDSDDER
PSFGGKRSRDYSAPVNFISAGIRKPAAEEKSDSDSDSETQARRETFPKDFEAKKLRTGGN
FKPSQRTFAGGIKSNTDFGSWERHTKGIGQKLLQKMGYVQGRGLGKNAQGIIAPIEAKQR
KGKGAVGAYGSERTKQSIKDFPVVDSEEEEEKEFQKEMSQWRKDPGGGKKKPKYSYKTVE
ELKAKGKVGKSLSAPQKEISQVKVIDMTGREQKVYYSYSQLAHKHNIPGEAPGQGAKEEK
PQGFALPELEHNLQLLIDMTEQEIIQNDRQLQYEQDMVVNLTHELEKLSEVLEREEQAIQ
NLSKVLETVEECERRIQPMCDNPLTLEECARIFEMLQDKYYEEYKMSEKADLSVAIVYPL
MKDYFKDWNPLRDPTYGTDVMSKWKNLLEEGHLLSHSAHDASMDPYHRLLWETWVPLLRS
IIAQWQPRNCAPMVDFLDCWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSW
IHPWLPLMQSRLEPLFSPIRNKLANALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKN
ILPKLGMCLSEFVINPHQQHMEVFHWVTDWEGMVSLSSIVGILEKHFFPKWLQVLCSWLS
NTPNYEEITKWYLGWKSMFSDLVLAHPAIKDKFNEALDIMNRAVSSSVGAYMQPGARESI
AYLTQTERRKDFQYEAMQERRDAESIAQRGIGAAAAVPMNFKDLIQSKAEEHNIVFMPLI
GKRHEGKQLYNFNRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcgcacctttatggcaaagatgaggacagcgatggagtggaaatggagaac
tttgagatcacggactgggacctacagaatgagtttaaccccaaccgcagaaagcatttc
caaacaaaagaggaggcgacctatgggatgtgggcagagcgggactctgatgatgagagg
ccaagctttggggggaaaaggtctcgagactactcggcccctgtcaattttatcagcgct
gggatccgtaagccagctgcagaagaaaaatctgatagtgattccgacagtgaaacgcaa
gcaaggagggaaactttcccaaaggattttgaggcaaagaagctaaggacgggtggtaat
ttcaaaccatcacagaggacatttgctggaggaataaagtcaaacacagattttggttct
tgggagcggcataccaagggaatcggccagaaacttcttcagaagatgggttatgtgcaa
ggaagaggcctaggaaagaatgctcaaggtatcattgcccccattgaagccaaacaaagg
aaaggtaaaggagcagtaggggcgtatggctcagaaaggaccaagcaatcgattaaggat
ttccctgttgtggattctgaagaagaagaggaaaaggaatttcagaaggagatgagccaa
tggcgtaaggaccctggcggagggaagaaaaaacctaaatactcatacaaaacagtagag
gagctgaaagccaaaggcaaagtgggaaagtctctgtctgcaccccaaaaagaaatatcc
caagtaaaggtgattgatatgactggtcgggagcagaaggtgtactatagttacagtcag
cttgcccacaagcacaacatcccgggagaggcgcctggtcagggggcaaaggaggagaaa
cctcagggctttgctttgccagagctggaacacaacttacagctgctaattgatatgaca
gagcaagaaatcattcagaatgaccgtcagctgcagtacgaacaggacatggtggtgaat
ctcacccatgagctggagaagctttcggaggtgctggaacgggaggaacaagccatacag
aacctaagtaaggttctagagactgtagaggagtgcgaacggaggatccagcctatgtgt
gataaccctctgacgctggaggagtgtgcgcgcatattcgagatgttgcaagacaagtac
tatgaggagtacaagatgtctgagaaggcagacctttctgtggccattgtctacccactg
atgaaagattatttcaaagactggaacccacttagggatcctacttatgggactgatgtc
atgagtaagtggaagaaccttctagaggaaggtcacctcctatctcacagtgcacatgat
gcatctatggacccataccacagattgctgtgggagacgtgggttcccctgttaaggagt
atcattgcccaatggcagcccagaaactgcgctcccatggtggactttttagactgctgg
gtccatttgctgccagtctggatcctggataacatactagatcagcttattttccccaaa
ttacaaaaagaggttgagaactggaaccccctgacagacaccgtcccaatccactcgtgg
attcacccctggcttcctttgatgcagtcgcggctagagccactcttctctcccattcgg
aataaacttgccaacgccctccagaaatggcaccccagcgattcctctgccaagctgatc
ctgcagccctggaaggaggtgtttacgccaggctcttgggaagccttcatggtgaagaac
attttgccaaagctaggcatgtgtctcagtgagtttgttattaatccgcaccaacagcac
atggaagtcttccactgggtcactgactgggaggggatggtctctttgtccagcatcgta
gggatcctggagaaacatttcttccccaagtggctgcaggttctgtgctcctggctcagt
aatacccccaattatgaagagatcaccaagtggtatctcggctggaagtccatgttctca
gacctggtgttggctcacccggccatcaaggacaaatttaatgaggctctggatatcatg
aaccgagctgtgtcctctagtgttggtgcctacatgcagccgggggcacgggagagcatc
gcctacctcacgcagaccgagagaaggaaggacttccagtacgaggctatgcaggagcgg
cgagacgcggagagcattgctcagagaggaataggggctgcagcggctgtgcccatgaac
ttcaaggacctgatccagtccaaggccgaggagcacaacatcgtatttatgcctctaatt
ggcaagcgtcacgaggggaaacaactttacaacttcaaccgcatagtgatctatatagac
agaggcgttgtgttcgtacagggagagaaaacatgggtgcccacctccctgcagagcctt
attgacatggccaagtag
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