Xenopus tropicalis (tropical clawed frog): 100101673
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Entry
100101673 CDS
T01011
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
xtr04148
Efferocytosis
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100101673 (vps11)
04148 Efferocytosis
100101673 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100101673 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100101673 (vps11)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100101673 (vps11)
Hops complex
100101673 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3H2C3
TPR_GEMI5
zf-RING_UBOX
Beta-prop_EML_2
zf-RING_11
CC4_CEP85
zf-ANAPC11
DLP_helical
zf-RING-like
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
100101673
NCBI-ProteinID:
NP_001120879
Xenbase:
XB-GENE-922526
UniProt:
B2GUQ1
LinkDB
All DBs
Position
7:81108949..81131419
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AA seq
914 aa
AA seq
DB search
MAAYLQWRRFVFFEKEQVRAPGEGGSLLTMPSGLTVCDSGRGSLLFGDMTGNIWFLPRSL
QLTSFQAYKLRVTHLHQLKQHNILVSVGEDEEGINPLVKVWNLEKRDGGSPLCTRIFPAI
PGNKPTVVSCITVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILQEGSYPVTGMAFR
QTGKTTHLFVVTTENVRSYELTQKDYPYTELDSHGCGLRCSALSDPSQDLQFVVAGNECV
YLYQPDERGPCFAFEGQKMIVHWYRGYLIIVSKDRLEFAGRAGDSQAMDRQTLTIYDLSN
KLIAYSSAFTEVVDVLAEWGSLYVLTRDGLLHALHEKDTQTKLEMLFKKNLFVMAISLAK
SQHLDSDGLSEIFRQYGDHLYNKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTA
YLQALHLQSLANADHTTLLLNCYTKLKDSARLEEFIKASEGEVRFDVEIAIKVLRQAGYH
SHALYLAEKHAHHEWYLKIQLEDIKNFQEALQYIGRLPFPQAESNMKRYGKTLMCHVPNE
TTQLLNNLCTSFPQNGEGSRANPEEFIPIFANNPSELKTFLEHMIKEHSDSPQGVYDTLL
ELRLQNWAHELDPQLKNQLHDDAISLLKSGRFKNVFDKALVLCQMHNFQNGVLYLYEQGK
LFQQIMHYHMQNDQYQKVIEACERYGEQETCLWEQALSYFARKEEDCKEYIAMVLGHIEN
RNLMPPLLVVQTLAHNSTATLSVIREYLINKMQKLSQKIEEDERTVHQYREDTARIRREI
QELRTSPKIFQKTKCSICSSSLELPSVHFLCGHSFHQHCFESYAENDVDCPTCLPENRKV
LDMIQAQEEKRELYDQFQHQLKHSSDGFSVVADYFGRGVFNKLTLITDAPTGRMGKSKEA
GLQRELLINTKRKA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacttgcagtggcggcgtttcgtcttctttgagaaggagcaggtgcgggca
cctggtgaaggtggaagtctgcttaccatgccgtctggtctgactgtctgcgactctgga
cgcggcagcctcctcttcggggatatgacaggaaatatatggttccttccccgctccctg
cagcttacctcttttcaggcatacaaattgcgtgtaactcatcttcatcaactgaagcag
cacaacatactggtttctgttggagaggatgaggagggaatcaatccactggtaaaagtt
tggaacctggaaaagcgagatgggggaagcccgctttgcacaagaatttttccagccatt
cctggtaataaacccaccgtagtgtcatgcatcacagtccatgaaaacctcaactttatg
gcaattggctttgctgatggaagtgttgtccttaccaagggtgatataacacgtgacaga
cacagtaagactcagatcttgcaagagggtagttacccagtcacaggaatggcattcaga
cagactggtaaaaccacacacctctttgtggtcaccacagaaaatgtgcggtcatatgag
ctgacacagaaggattatccatatactgaactggactcccatggctgtggtctgaggtgc
tctgctttgtctgatccttctcaggacttgcaatttgtggtggcagggaatgaatgtgtg
tacttatatcagccagatgagaggggaccttgctttgcctttgaaggacagaagatgatc
gtgcactggtatcgaggatatctcattatagtatcaaaagacagattagagtttgctgga
cgtgcaggggatagccaggcaatggatagacaaacactgactatatatgacctaagcaac
aagctgattgcctacagcagtgctttcacagaagtcgtggatgttctggcagagtggggt
tccttgtatgttttgacacgtgatggactactgcacgctttacatgaaaaggacacacaa
accaaattggagatgttgtttaagaagaacctctttgttatggccatttctctagcaaag
agccagcatttagacagtgatggcctttctgagatctttcgtcagtatggcgaccacctt
tacaacaagggagaccacgatggagcaatccagcagtatattaggacgattggtaagcta
gagccctcttatgtgattcgcaagtttctggatgctcagaggatacacaatttgactgca
tatcttcaggctttgcatctacaatctcttgccaatgcagaccacacaacgttgctgtta
aactgttacaccaagctaaaggacagtgcccgcctagaggaattcattaaggccagtgaa
ggagaggtgcggttcgatgtagaaatagccataaaggttcttcgacaagctgggtatcac
tctcatgccctctaccttgcagaaaagcatgcccatcatgagtggtacctaaagattcaa
cttgaggacattaagaattttcaggaggcacttcagtacattggacgtcttcccttccct
caagctgagagtaacatgaaacgctatgggaaaactcttatgtgtcatgtacccaatgag
accacccagttactgaataatctgtgtactagtttccctcagaatggtgagggtagcagg
gccaatcctgaggagtttattccaatctttgcgaacaacccttcagagctgaagacattt
cttgagcacatgataaaagagcacagtgattcccctcagggtgtctatgacacactgttg
gagctgcggttgcagaattgggctcatgagttggacccacagttaaagaatcagcttcat
gatgatgctatatccctactgaagagtggtcgctttaagaatgtgtttgataaggctcta
gtcttgtgccagatgcacaattttcagaatggagtgctgtacctgtacgagcagggtaaa
ctcttccagcagatcatgcattatcacatgcagaatgatcagtatcagaaagtcatagaa
gcctgtgagcgatatggagagcaggagacctgtctttgggagcaagcacttagctacttt
gccagaaaggaagaagactgcaaggaatacattgctatggttttggggcacattgagaac
aggaacctcatgccaccactgttggttgttcaaaccctggcacataactccactgcgact
ctgtctgtaattcgtgagtacttgatcaacaaaatgcagaagctgagccagaagattgag
gaggatgagagaacagtgcatcagtacagagaggatactgcacgcattcgccgagagatc
caagaactccgcaccagccccaaaattttccagaagacaaagtgcagtatatgtagcagc
agtcttgagctgccatctgtgcatttcttgtgtggtcactccttccaccagcactgcttt
gagagctatgcagaaaatgatgtggactgccctacctgcctgcctgagaacaggaaagtc
ttagatatgatccaagcacaggaggagaagagagaactttatgaccagttccagcaccag
ttaaagcattcaagcgatggatttagtgttgtggcagattattttggccgtggggttttc
aacaaattgacactcataacagatgcacctactgggagaatgggcaagtcgaaggaagcc
ggcctgcagcgagaacttctgatcaacaccaagaggaaagcgtaa
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