KEGG   Xenopus tropicalis (tropical clawed frog): 100101702
Entry
100101702         CDS       T01011                                 
Symbol
six1
Name
(RefSeq) homeobox protein SIX1
  KO
K15614  homeobox protein SIX1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100101702 (six1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    100101702 (six1)
SSDB
Motif
Pfam: SIX1_SD Homeodomain Homeobox_KN HTH_3 YdaS_toxin HTH_72 Phage_mat-A
Other DBs
NCBI-GeneID: 100101702
NCBI-ProteinID: NP_001093693
Xenbase: XB-GENE-480717
UniProt: F6Y0S9
LinkDB
Position
8:102415669..102419810
AA seq 284 aa
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNTSSNKQNQLSPLDGGKSLMSSSEEEFSPPQSPDQNSVLLLQGSLTH
PGGSSYSLSALSASQGGHGLQGHQHQLQDSLLGPLTSSLVDLGS
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtctatgctgccttcctttggcttcactcaggagcaagtggcctgtgtgtgcgaggtg
ctgcagcagggaggcaacctggagagactgggcaggttcctatggtccttgccagcctgt
gatcacctccacaagaatgagagtgtgctgaaggcaaaggccgtggtggcatttcacagg
ggcaacttcagagaactgtataagatactggagagccatcagttctccccgcacaaccac
cccaaactgcagcaactctggctcaaggctcactatgtggaagcagagaaactgaggggg
agaccgctgggggcagtgggcaagtacagggtcagaaggaaattccccctgcccaggaca
atctgggatggagaagagaccagttactgctttaaggagaagtcccgaggggtgctgaga
gaatggtatgcccataacccttacccgtctcccagggagaagcgggagctggctgaggcc
actggactaaccaccacccaggtcagcaattggttcaagaacaggaggcaaagggacaga
gcggcggaagcaaaagagagggaaaatacagaaaacaataacacatctagcaacaaacag
aatcagctgtcacccctagatggaggaaagtcgctaatgtccagttcagaagaggaattc
tcccccccacagagcccggatcagaactctgtgctcctgttgcagggcagcctcacccac
cccggcggctcctcttattccctgagcgctctcagcgcctcccagggcggccatggccta
caggggcaccagcaccagctgcaggactctctgcttgggcccctcacctccagcctggtg
gatctgggatcgtaa

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