Xenopus tropicalis (tropical clawed frog): 100101702
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Entry
100101702 CDS
T01011
Symbol
six1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100101702 (six1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
100101702 (six1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
100101702
NCBI-ProteinID:
NP_001093693
Xenbase:
XB-GENE-480717
UniProt:
F6Y0S9
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Position
8:102415669..102419810
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AA seq
284 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNTSSNKQNQLSPLDGGKSLMSSSEEEFSPPQSPDQNSVLLLQGSLTH
PGGSSYSLSALSASQGGHGLQGHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgctgccttcctttggcttcactcaggagcaagtggcctgtgtgtgcgaggtg
ctgcagcagggaggcaacctggagagactgggcaggttcctatggtccttgccagcctgt
gatcacctccacaagaatgagagtgtgctgaaggcaaaggccgtggtggcatttcacagg
ggcaacttcagagaactgtataagatactggagagccatcagttctccccgcacaaccac
cccaaactgcagcaactctggctcaaggctcactatgtggaagcagagaaactgaggggg
agaccgctgggggcagtgggcaagtacagggtcagaaggaaattccccctgcccaggaca
atctgggatggagaagagaccagttactgctttaaggagaagtcccgaggggtgctgaga
gaatggtatgcccataacccttacccgtctcccagggagaagcgggagctggctgaggcc
actggactaaccaccacccaggtcagcaattggttcaagaacaggaggcaaagggacaga
gcggcggaagcaaaagagagggaaaatacagaaaacaataacacatctagcaacaaacag
aatcagctgtcacccctagatggaggaaagtcgctaatgtccagttcagaagaggaattc
tcccccccacagagcccggatcagaactctgtgctcctgttgcagggcagcctcacccac
cccggcggctcctcttattccctgagcgctctcagcgcctcccagggcggccatggccta
caggggcaccagcaccagctgcaggactctctgcttgggcccctcacctccagcctggtg
gatctgggatcgtaa
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