Xenopus tropicalis (tropical clawed frog): 100101739
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Entry
100101739 CDS
T01011
Symbol
lingo1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 precursor
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100101739 (lingo1)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
100101739 (lingo1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
V-set
LRRNT
Motif
Other DBs
NCBI-GeneID:
100101739
NCBI-ProteinID:
NP_001093719
Xenbase:
XB-GENE-921957
UniProt:
A4IIW9
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Position
3:complement(92984851..93124140)
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AA seq
606 aa
AA seq
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MILQLPSCLCPILLIVVGSILSGSASGCPQRCDCSPQDRSVLCHRKRYLDVPEGIPTDTR
LLDLSKNRIKALNQDEFSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKLI
PLGVFTGLSNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLE
ELTLEKCNLTSVPTEALSHLHGLITLKLRYLNINVIRDYSFKRLYRLKNLEIAHWPYLDT
MTSNGLYGLNLTSLSITHSNLSSIPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQ
EFHLVGGQLSVVEPYAFRGLNHLKVLNVSSNYLSTLEESSFHSVGNLETLILDKNPLACD
CRLLWIFRRRWRLNFSRQQPSCSSPEYVQGKEFKDFPDVLQPNYFTCRRARIQDHSAQVV
YVDEGHTVHFFCRADGDPPPTILWQSPRKTFITSKSNGRLTVFPDGTLEVRYAQVQDNGT
YHCIASNAGGNDTSLAHLHVRSYSPNWPHKPNKTFAFMSNQPNESDVNSTRASVPFPFDI
KTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGLSSADAPRK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgattctccaactgccatcctgtctgtgtcccatccttctgattgttgttggatccatt
ttgtctggctcggcctcaggttgtccccagcgctgtgattgctctcctcaggaccgatct
gtgctttgccatcgcaaacgttatcttgatgtccccgagggaattcccacagacacacga
ttattggacctcagcaagaatcgtatcaaggctctcaaccaggatgaattctctgccttc
ccatatctagaggagttggagctcaatgagaacattgtgagcataattgaacctggagca
ttcaatggtctatttaatctgcggtcactgggactgcgaagtaatcgtctcaagctaatc
cctctaggtgtgttcacagggcttagtaacctaacccaattggacatcagtgagaataaa
attgttatactgttagatgacatgttccaggacctttacaaccttaagtctcttgaagtt
ggcgataatgatctggtttatatctcccaccgtgcctttcgcggtctcaatagcttggaa
gagttgacattagagaaatgcaacctcacctcagtgcccacagaggcactttcccacctt
catggcctcatcaccttgaaacttcgatatctcaacataaatgtaattagagattactct
ttcaaaaggctgtaccggttaaaaaatctggagatagcacactggccatatctggacact
atgacatctaatggcctttatggactgaacttaacttctctttctattacacacagcaat
cttagctctataccttatgttgcaatccgtcatcttgtttatctccgcttcctcaacctc
tcctacaaccccattacagcagtggagggctccatgttgtatgagttgctgagattgcag
gagtttcaccttgttggtggtcaactgtctgtggtggaaccatacgcttttcgtggtctc
aaccatctgaaggtgctcaatgtctcttctaactatctcagtacactagaagagtcctct
tttcattctgtgggcaacctggaaacactcatactggacaaaaatccattggcatgcgac
tgccgtcttttgtggatctttcgacgacgctggaggcttaacttcagccgacagcagccc
tcctgttctagcccagaatatgtacaaggaaaagagtttaaggatttccccgatgtcctt
cagcctaactatttcacatgtcggcgtgctcgcattcaggaccacagtgcgcaggtagta
tatgtggatgagggtcacactgtacattttttctgccgagcagatggagaccctccacca
actattctgtggcaatctccacgaaagacatttatcaccagcaaaagtaatgggcgactg
actgtatttccagatggcacactggaggtgcgctatgctcaggtacaagataatggaact
tatcactgcatagcaagcaatgcaggtggcaatgacacctccttggcccatctccatgtg
cgaagctactctcctaactggcctcacaaacccaacaagacctttgcttttatgtccaat
caaccaaatgagagtgatgtgaacagcacccgagcaagtgttcccttcccatttgatata
aagactttaattattgccacaacaatgggtttcatctctttcttgggtgtagtcctcttc
tgcttggtcttgcttttcttatggagcaggggtaagggcaacaccaaacacaacattgag
atagagtatgtgccgcgaaagtctgatgctggactctcttcagcagatgcccctcgcaaa
ttcaacatgaagatgatctga
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