Xenopus tropicalis (tropical clawed frog): 100124509
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Entry
100124509 CDS
T01011
Symbol
sdad1
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
100124509 (sdad1)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100124509 (sdad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
DUF7379
Phage_gene29
Motif
Other DBs
NCBI-GeneID:
100124509
NCBI-ProteinID:
NP_001095942
Xenbase:
XB-GENE-1008732
UniProt:
A4IIB1
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All DBs
Position
1:81430454..81450200
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AA seq
689 aa
AA seq
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MSGRNNNKLPTNLPQLQNLIKRDPTSYREEFLQQYKHYLSVIEIFKLQPDKPNKELSTLV
MFMAQTAHCFPQYLEDFPEQLKSLLRVHHTVMDPDQRMTLCKALILLRNKNLISPSVLLE
LFFELLRCQDKLLRKTLYTHIVTDIKNINAKHKNNKVNTTLQNFMYTMVRDNNAIAAKIS
LDVMIELYRRNIWNDAKTVNVISTSCFSKVTKILVAALKFFLGKDEEEKKDSDSESEDEG
PTARDLMVRYSTGKKNTKNKKKLEKAMKVLKKHKKKKRPEVFNFSAIHLVHDPQEFAEKL
LKQLEASKERFEVKLMHMDLISRLVGIHELFLFNFYPFVQRFLQPHQREVTKILLYAAQA
THHLVPPEISQSVLRTIANNFVTDRNSGEVMTVGINAIKELTARCPLAMTEELLQDLALY
KTHKDKNVSMSARSLIQLFRSLNPEMLQKKFRGKPTEASKEARIHAYGELDAKDYIPGAE
VLEVEQEKTEEPEEDDGWESASLSDDDEDGEWIDVHHSSDEEQQEVADKIQAMPAEERKA
KAATVSASRLLSQEDFKKIRLAQLAKEMNNAPGKSVKRKNIEIDSDEEERSGELLSLRDI
EHLHKKPKSDKETRLATVMAGRTDRKEFVRKKSKMNPHASSTNKEKKKNKNFMMMRYSQN
IRSKNKRSFRDKQIALRDSLLKKRKRLMK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaggaataataacaagctgccgaccaatctcccgcagctgcagaacttgata
aagagagatcctacctcctacagggaagagtttttgcagcagtataagcactacctttct
gttattgaaatttttaagcttcagccagacaagccaaataaagaattgtctaccttggtt
atgtttatggcacagacggcacactgttttccacaatatctggaagattttccagagcag
ttgaaatctttgctacgtgtacatcacaccgtgatggatccagatcagagaatgacattg
tgcaaagctttaattttattgcggaataagaatttaataagcccgtcagttctattggaa
ctattctttgagcttctgagatgccaagataagcttctacgaaaaactttatacactcat
attgtcacggacatcaagaatataaatgccaaacacaagaacaacaaagtgaatacgact
ctgcagaattttatgtacaccatggtaagagacaacaatgccattgctgcaaagatatcc
cttgatgtcatgattgagctttacagacggaacatctggaatgatgccaaaacagtcaat
gtgatatctacttcctgtttttctaaagtcacaaagattttagtcgctgcgctgaaattc
ttcttgggaaaggatgaggaggagaaaaaggacagtgattcagaatcagaggatgaaggc
cccactgccagagaccttatggtgagatattccacaggaaagaagaacacaaagaacaaa
aaaaagctagaaaaagccatgaaagttttgaagaaacataaaaagaagaaaagaccagag
gtgtttaatttttcagcaattcatttggtgcatgatccccaagagtttgcagagaagctg
ctgaagcagttggaagcctccaaggaaagatttgaggttaagctcatgcacatggacctg
atctccaggctagttggaattcatgagctgttccttttcaacttctacccttttgtacaa
agatttcttcagccgcaccaaagagaggtgaccaagattctgctgtatgctgcacaagca
acccatcacctagttcctcctgaaatttctcagtctgttctcaggaccattgctaacaac
tttgttacagacagaaattcaggagaagtgatgacagttggaataaatgccattaaagaa
cttactgcaagatgtccactagcaatgaccgaagaactgctacaagatcttgccctttat
aaaactcataaggataaaaatgtttccatgtccgcaagaagtttaattcaactgttccgc
tcactaaatcctgaaatgttgcagaagaaattcagaggcaaacctacagaagcttccaaa
gaggcacggattcatgcgtatggagagcttgatgccaaggactatattcccggtgcagag
gtgttggaagttgaacaagagaaaacagaagagccagaagaagatgatggctgggagagt
gccagtctcagtgatgatgatgaggatggagaatggatagatgttcatcactcttctgat
gaggaacagcaagaagtggcagacaaaatccaggccatgccagccgaagaaagaaaagcc
aaggcagccacagttagtgccagcaggcttctctctcaggaagatttcaagaaaattcgt
cttgcacagttggccaaagaaatgaacaatgcaccaggaaaatctgtgaaaagaaaaaac
atcgaaattgacagtgatgaggaggagcgaagcggagagttactttcactcagagatatt
gagcatttacataagaagccaaagtctgataaagaaacaagacttgctacagttatggct
ggaagaacagacagaaaggaatttgtaagaaaaaagtcaaaaatgaatcctcatgccagc
tccaccaacaaggaaaagaagaaaaataaaaatttcatgatgatgcgatacagccaaaat
attcgttctaaaaacaagcgctctttccgtgacaagcagattgcactgcgggattcactt
ttaaagaaaaggaaaaggctcatgaaataa
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