Xenopus tropicalis (tropical clawed frog): 100124728
Help
Entry
100124728 CDS
T01011
Symbol
rims1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100124728 (rims1)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
100124728 (rims1)
Small GTPases and associated proteins
Rab associated proteins
100124728 (rims1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
100124728
NCBI-ProteinID:
NP_001096180
Xenbase:
XB-GENE-1012759
UniProt:
A4IHZ8
LinkDB
All DBs
Position
5:complement(92266642..92465470)
Genome browser
AA seq
1518 aa
AA seq
DB search
MSSSMGPRGPRPPTVPPPMQDLPDLSHLTEEERTIIMAVMDRQKQEEEKEEAMLKRLHQQ
FESYKEQIRKIGEDTRRYPGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNVMWVCNLCRKQQEILTKSGDWFFGSGVQQPSSQDGTLSDTATGASTDAPREKKA
RLQERSRSQTPLSTAAVAGSQGTPPSSLQSDRSKGSEPSLQSSVQEPKLSSRSRSEPPKD
RKKALAISEQNGKVLKSDRKRVQKCLNQQAEGHMDDREHKERRESRRLGKGRSQDIPEKA
EEDTNMEEDKQRTEDEYQTRYRSDPNLARYPVKPQPEEQQMRMHAKVSKARHERRHSDAS
LPHTELDEAEVPENKLGKNSQGSASQDKKSVLENKRSYSVDRNGEVLVSKPKQSANHSLH
SSQHSPVPPEHVDSMNHDSFKKQSRLDPSSALLTRKATREKMETMLRNDSLSSDQSESVR
PSPPKPHRSKREKKKRQMSVSSSDDEGASTPEYTSCEDAEIESESVSEKGDLDCFWLDPA
TWHSRETSPLGSHPVTWQPSKEGDRLIGRVILNKRTSMPKESGSLLGLKVVGGKMSETGR
LGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEDVYNIILQSKSEAQVEIIVS
RPIGDIPRIPENSHPPLESSSSSFESQKMDRPSISVISPTSPGALKDAPQVLPGQLSVKL
WYDKVGHQLIVNVLQARDLPTRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSSEPKWN
QSFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTH
DESSLPLPQPSPFMPRRHVHGENSSKKLQSSRSNARESRSTTLTVPEHQRPTHHRSRSVS
PHRVDDQGRTRSRLPNVPLQRSLDEIHQMRRSRSPTRHHDASRSPVDRRSRDSDSQYLSE
QESELLMLPRAKRGRSAECLHTIRNTVRHSKTLPPKMPLLEYGSHWRLYSELQPSLDRAR
SASTNCLRPDTSLHSPERERQPRKLERSSNQKQNRKSTVSEIERNHQLGSQSSADSSFSS
RRGRQLPQVPVRSNSTEQEPESFSSSSKANLSMEERTRQMKIKVQRYKQIAGSSSSQEQE
REQYTKYNTHRDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRRR
LCSFTPRMQSRRMGTSGIAITKSTSVSGEIYKLEHNDGSQSDTAVGMVGTGGKKRRSSLS
AKVVAIVSRRSRSTSQLSQTDSGNKKLKSTIQRSTETGMAAEMRSRMVRQPSRESTDGSI
NSYSSEGNLIFPGVRLGVDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLE
VEVIRARGLIQKPGSKSTPAPYVKVYLLENGACVAKKKTRIARKTLDPLYQQTLVFEESP
NGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTR
RASQSSLESSTGPPSIRS
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcaatggggcccaggggccctcggccacccacagtgcctccccccatgcag
gatctccccgatctcagccatctgacagaggaagagagaacaattatcatggcagtgatg
gaccgacagaagcaggaggaggagaaggaagaggccatgctaaagagactccatcaacag
tttgaaagctataaagagcaaatcagaaaaataggtgaggacacacgccgttacccagga
gagcacaaggacgatgcaccaacgtgtggaatctgccacaaaacaaagtttgctgatggc
tgtggccatttatgctcctattgccgtacaaaattttgtgcccgatgtggaggtcgcgtt
tcccttcgttcaaacaatgttatgtgggtttgcaatttgtgtcggaagcaacaggaaatt
ttgacaaaatctggggactggttctttggaagtggggtgcagcagccatcttctcaggat
ggaacattaagtgacactgctacaggagcaagtacggatgcaccaagggaaaagaaagct
agacttcaagagagatctcgatctcaaacgcctctaagcaccgctgcagtggcaggttca
caaggaacccctccttctagtttacagtctgataggagcaaaggctcagaaccatcacta
caatcctcagtccaagagccaaaattatcatcaagatcaagaagtgaacctccaaaagac
aggaagaaggccttagcaatttcagagcaaaatggaaaagtcttgaaaagtgatcgaaaa
agagttcagaagtgtttaaaccaacaagctgagggacatatggatgacagagaacataaa
gaaaggagagaaagcagaagattagggaaaggaaggtcccaggacattccagaaaaagca
gaggaagatacaaacatggaagaagacaaacaaagaacagaggatgagtatcaaacacga
tacagaagtgatcctaatttagccaggtatccagtaaaaccacaaccagaagaacagcaa
atgcgcatgcatgcaaaggtttcaaaggcaaggcatgaacgacggcacagtgatgcatct
ttaccacatacagagctagatgaagctgaagttcctgagaataaactaggcaaaaactca
caaggatcagcatctcaggacaaaaaatcagttttggagaataagaggtcttattctgta
gacagaaatggtgaagtattagtttccaagccaaaacaatctgccaatcacagtctccat
agttctcaacacagtccggttcctccagaacatgtagactctatgaaccatgattccttt
aaaaaacagagtagattagacccaagttctgctcttttaacaaggaaagctacacgtgaa
aagatggagacaatgttgagaaatgactcccttagttccgatcaatcagaatctgttaga
ccttccccaccaaagccccacaggtcgaaaagagaaaaaaaaaaaagacaaatgtcagtt
agtagctcagatgatgaaggagcatcaaccccggaatatacaagctgtgaagatgcagaa
atagaaagtgaaagtgttagtgaaaaaggtgatttggactgtttttggttggatcctgct
acatggcatagcagagaaacttcacccctagggtcgcatccagtaacctggcagccatct
aaggagggggatcgtttaattggtcgcgtaattctaaataaaagaacaagtatgccaaaa
gaatctggatcacttctgggtttgaaagttgtagggggaaaaatgtcagaaacaggacgc
cttggtgccttcatcaccaaagtaaagaaagggagcctcgcagatgttgttggccattta
agagcaggagatgaagtcttagaatggaatggaaaacctttgccaggagcaacaaatgaa
gatgtttacaacattattttacaatcaaagtcagaggcacaagttgaaatcatagtttca
aggcctattggagacattccaaggattccagaaaactctcatccaccattagaatctagt
tccagttcttttgaatctcaaaagatggatcggccttcaatatctgtcatttctccaact
agtcctggagctctaaaagatgcacctcaggtcctgccaggacagctttctgtaaaattg
tggtatgacaaagtgggccatcagctaatagtaaatgtcttgcaagcaagagacctgcca
acacggccagatggaaggcctaggaacccttatgtaaaaatgtacttccttccggacaga
agcgataaaagtaaaaggaggaccaaaacagtgaagaaaagctctgaaccaaaatggaac
caatcatttctctattcccatgtgcaccgtagagactttagagagcgaatgttagaaata
actgtgtgggatcagccaagagtacaagaagaggaaagcgagtttcttggcgagatccta
atagaactagagactgcactattagatgatgaacctcactggtataagctacagacgcac
gatgaatcttcactacctctgcctcagccatcacctttcatgccaaggagacatgttcat
ggagaaaattctagcaaaaaattacaaagctcaaggtctaatgctagagaaagtagatct
actacattaacagtgccagaacatcaaagaccaactcatcaccgctcacgttcagtatct
ccacaccgtgttgacgatcagggcaggacccgttcacgtttaccaaatgtgccattacag
agaagcctagatgaaatccatcaaatgagacgatcacgttctccaacaagacaccatgat
gcctcccgcagtcctgtcgatcgcaggtcaagggactcagacagtcagtatttgtctgaa
caagaaagtgaactccttatgcttccccgggcaaaacgtggacgaagtgcagagtgccta
cataccatcagaaatactgtaaggcacagtaaaacattaccacccaagatgcctttacta
gagtatggttctcactggagactctacagtgaactgcagccctcccttgacagggctaga
agtgctagtaccaactgcttgagaccagatactagtttgcattcaccagaacgagaaagg
cagcccagaaaactggaaagatctagcaaccagaaacaaaataggaaaagcactgtttct
gaaatagaaagaaatcaccaactcggaagccagtcatcagctgattcatcttttagtagt
cgacgaggaaggcagcttccacaagtcccagtaagaagcaacagtacagaacaagaacca
gagagttttagttcatcatcgaaagcaaatttatcgatggaagaacgtacaagacagatg
aagataaaagttcaacggtataagcaaatagctggttctagttcaagtcaagaacaggaa
cgagagcaatatactaagtataacacacacagagatcagtacagaagttgtgacaacgtc
tcagccaaatcgtctgatagtgatgtcagtgatgtgtcagccatttcccgtaccagtagt
gcctcacgtctcagtagcacaagctttatgtcagagcaatctgaacgcccccgcaggaga
ctatgttcctttacacccagaatgcaaagcaggcggatgggtacttcagggatagccata
actaagagcacaagtgtgagtggagaaatttacaaactggaacacaatgatggaagtcag
tctgacacagccgttgggatggttgggaccggtggaaagaaaaggagatccagtctaagt
gccaaagtagttgccatagtatcacgaagaagcagaagcacatcccagcttagccaaaca
gattctggcaacaagaaattaaaaagtactattcagagaagcacagaaacaggcatggca
gcagaaatgagaagtcggatggttcggcaaccgagccgggagtccacagatggaagtatt
aacagttacagctcagagggcaatttaatttttccaggggtgagactgggggttgatagc
caattcagcgactttcttgatggactaggaccagcacaacttgtaggcagacagacatta
gcaactccagcaatgggtgatattcagattggaatggtagataaaaaggggcaattagaa
gtggaagttatacgagcaagaggtctaatacaaaagccaggatcaaaatcaactccagct
ccgtatgtaaaggtatatcttttagaaaatggagcgtgtgtcgccaagaaaaagacaaga
attgcacggaaaacccttgatcctctttatcaacagactttggtttttgaagaaagtccg
aatggaaaggtccttcaggtaattgtctggggagattatggtcgaatggatcacaaatgc
ttcatgggtgttgcacagattttattggaagaactcgatctatcaagtgtggtgattgga
tggtataaattgtttccgccatcatcgttggtggatccaacgctgacaccccttactcgc
agggcttcccaatcatctcttgaaagttctacaggtcctccttccatacgatcgtaa
DBGET
integrated database retrieval system
