Xenopus tropicalis (tropical clawed frog): 100124734
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Entry
100124734 CDS
T01011
Symbol
l1cam
Name
(RefSeq) neural cell adhesion molecule L1 precursor
KO
K06550
L1 cell adhesion molecule
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100124734 (l1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100124734 (l1cam)
04090 CD molecules [BR:
xtr04090
]
100124734 (l1cam)
04091 Lectins [BR:
xtr04091
]
100124734 (l1cam)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
L1 family
100124734 (l1cam)
CD molecules [BR:
xtr04090
]
Proteins
100124734 (l1cam)
Lectins [BR:
xtr04091
]
I-type lectins (Siglecs)
100124734 (l1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Ig_5
Ig_4
C2-set_2
fn3_2
V-set_CD47
Receptor_2B4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
100124734
NCBI-ProteinID:
NP_001096185
Xenbase:
XB-GENE-5914700
UniProt:
A4IHA8
LinkDB
All DBs
Position
8:26457326..26571883
Genome browser
AA seq
1250 aa
AA seq
DB search
MPLGSGPCLLGTVLVSLLCSHMEAFQLPKGYVMQEIMYPPVITEQSPEKYVLYPNDDIVL
KCEAKRNAKAKYTWKKDGETFQPDNDPRVSRKKDSGTLNISGNGNSMKDFQGKYRCYATN
DLGTAISHEIHVITESTPKWQKELIRPLDIEEGASLILPCNPPKSAVPPRVIWMNSNLLH
ITQDERVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQKEAISIKVRPTNSVKFR
KPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLLGSTYNERIQFDDFKKTLH
IDKVQDEDDGDYQCIAKNTQGSSSHTFTVVVESAPYWINKPEDGIYAPGEDIILHCEVGG
KPKPKVTWKINGKSLKDSDLYHNWKLIDGSLVLNNMQLNDTSVVQCEARNKHGNLLANAF
VYVVELPPQILTRNDEQYIVVEKTNVSMDCRAFGTPFPTIQWESDLEDNLFALDQFSMHT
NGTLTITGVAKEDEGIYRCTASNNQGNVSISAYLDVRNATKIITPPMEQHARKGGKAIFQ
CKVEFDPKMSDKIIQWRKNGNEIKEDADNDKYFIEDYTLSISNVQESDHGMYTCAAHTEL
DAVELTAELVVIDLPEAPFDLELSNAQETSITLTWTPGNDNNSPIEEFIIEYEEDSFEPG
VWHELTRVDGDMFNVDLDLSPYVNYQFRVIAVNEVGPSNGSNPSDRYETPAFAPAKNPRE
VKGEGTEPQNMYISWKPLKGIDWNGPGFKYLVKWRQLGKEEWKEVVADSPPVLVSGTSIF
EPYEIIVQSVNDIGRATEPKPVIGHSGEDMPDITPENVGLEAMNESAIKVAWLPVQKNGL
NGHLKGFMVYYTRHNGHNRHPGKLLVHGNTTHALITGLKPYSNYSVEVAIINGKGEGEHS
ESRMIRTDEGVPSPPSFLRLERQSDTSLTLIWGPPETPNGILTGYEIYHQIVNKTHTGAK
YFSETINDPTQQNWTLSNISSKDTYRFYLYATTSVGQSEAVMVEGSTMQEIEVPPVLNVS
IETGDNVVTLNWMQLEGPSNAEIRVEIRNKSSELLWRHYGSVNTTDSTFQLSGLLPGTFY
FIRLMALNHTQHVEIWSDMVQTSGTAIPTKQGGFPNEGWFIALITAIVVLLLILLILCFI
KRSKGGKYSVKDKEDTQGDSEARPMKDETFGEYSDNDEKPFTSSQPSLNGEIKQLGSDDS
LADYGGSVDVQFNEDGSFIGQYSGKKEKEPTGGNESSGATSPVNPNVAVE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgggatcgggaccttgccttctggggacagtgcttgtctctttactctgcagc
cacatggaggccttccagctgcctaaaggatatgtaatgcaagaaatcatgtatccacct
gtgattactgagcagtccccagaaaagtatgtgttgtaccccaatgatgacattgtgctc
aagtgtgaagccaagagaaacgccaaggcaaaatatacctggaaaaaggatggggaaacg
tttcagccagataatgacccaagagtcagtcgcaagaaagattcaggaaccttaaacatt
tctggcaacgggaactcaatgaaggatttccagggcaaataccggtgctatgccaccaat
gatctgggcacagccatctcacacgagatccatgttatcactgagagcaccccaaaatgg
caaaaagaactgatccgccctcttgatattgaagagggagcctcgctaatattaccatgt
aacccacctaaaagcgcagtgcccccacgagttatctggatgaatagcaatttgttgcac
atcacacaggatgagcgggtgtcaatgggtgtgaatgggaatctgtatttctccaatgta
caaaagcaagatgaacatcctgactacatctgtcacgcccagtttgttggtgcccgtacc
attgtgcagaaggaggcgatatctatcaaagtcagacccacaaattctgtgaaatttcga
aaaccagaaatgatgttacccgagggctccatgagcactgttctggcattaagggaccaa
cctttgcagctggagtgcatagctgaaggactccctaccccagagattgagtggattccc
ctccttggctccacttacaatgagcgcattcaatttgatgactttaagaagacccttcac
attgacaaggtgcaagatgaggatgatggggactatcagtgcattgccaagaacacccag
ggcagctccagccataccttcacagtggttgttgagtctgccccttactggattaataaa
ccagaggatggaatctatgcaccgggtgaggatattatactgcactgtgaagtcggaggg
aaacccaaacctaaggtcacatggaagattaacggtaaatctttgaaagactcagatcta
taccacaactggaagctgatagatggaagtctggtcttaaacaacatgcaactcaacgac
acgtctgttgttcaatgcgaagcccgcaacaaacatggaaacctcctcgccaatgctttt
gtctatgtagttgaactgcccccacagatcctcaccagaaacgatgagcagtacattgta
gtcgaaaagacaaatgtctcaatggactgtagagcttttgggactccttttccaacgatc
caatgggagagtgatctggaagacaacctgtttgcccttgatcagttttccatgcacact
aatgggacactgaccataacgggagtggcgaaggaagatgaaggaatatatcggtgcact
gccagcaacaaccagggaaatgtcagcatctctgcctacttagatgtcagaaacgctact
aagatcattactccccctatggagcagcatgcaagaaaaggtggaaaagcgatttttcag
tgcaaagtggaatttgatcccaaaatgagtgataaaataatacagtggaggaaaaatggc
aatgagataaaagaagatgccgacaatgataagtacttcattgaggactacaccctaagt
atctccaatgtacaagagagcgaccatgggatgtatacctgtgcggcccacactgaactg
gatgccgtagaactgactgccgaactggtggtgattgatcttcccgaagctccttttgat
ttggagctttctaacgcacaggaaaccagtataacgctcacctggaccccaggcaacgat
aacaacagtcccattgaggaattcattatcgagtatgaggaagacagctttgaaccagga
gtatggcatgaactcactagagtggacggggatatgtttaatgttgatttggatctctct
ccctatgtcaactaccagttccgagtgattgcagtgaatgaggttggacctagcaatgga
agcaacccatcagatcgttatgagactcctgcatttgctccagcaaagaatcccagagag
gtgaaaggggagggcacagagccacaaaacatgtacatttcctggaagccattgaaaggc
atcgactggaatggccctggcttcaaatatcttgtaaaatggaggcaacttggtaaagaa
gagtggaaggaagtggtagcagatagcccccctgtccttgtgtcaggcactagcatattt
gagccttatgagatcatagtccagtctgtcaatgatatcggcagagctactgaacccaaa
cccgtcattggccattccggggaagacatgcctgacattacccctgagaatgttggctta
gaagctatgaacgagagtgcaatcaaggttgcatggttgcctgtgcagaagaatgggtta
aacggtcatttgaagggatttatggtatactataccagacataacgggcacaacaggcac
cctggcaagttactggtccatggtaacacaacacatgctttaattaccgggctaaaacct
tacagcaactactcagtggaagtcgccatcataaacggaaagggggagggggagcatagc
gagtcacgcatgatacgcactgatgaaggagtgccaagtccaccttcatttttacggctg
gagcgccaatctgacacatcactgacactcatatggggcccccccgaaactcccaatgga
attctgacaggatacgagatttatcatcagatagtgaacaaaactcacactggagcaaag
tacttctctgaaaccatcaatgatcccacgcagcaaaactggacactttcaaatatcagc
tccaaagacacctaccggttctatttgtatgccactacctcagtgggacagagtgaagct
gttatggtggagggcagcactatgcaggagatagaggttcctcctgtgctgaatgtcagt
atcgagactggggacaacgtggtcacactaaactggatgcaactggaggggcccagtaat
gcagagatcagagtggagatcaggaacaaatccagtgaactattgtggcgccactatggt
tcagtgaacaccaccgactcgaccttccagctgagcggcctgctccccgggactttttat
ttcatacgccttatggccctcaatcacactcagcatgttgaaatctggagtgatatggta
caaaccagtggaacagcaattcccacaaaacagggaggatttcccaatgaaggctggttt
attgcactgatcactgccattgtagtcctgctgctcatcctgctcatcctgtgctttatc
aagcgcagcaaaggaggaaagtactctgtgaaggataaagaagatactcaaggggactct
gaagcacggccaatgaaggatgaaacctttggggaatacagtgacaatgacgagaagcct
tttactagcagtcagccctccctcaatggggagatcaagcaactaggcagtgacgacagc
ctggccgactatggtggtagcgtggatgtccagttcaatgaagatggctcgttcattggc
cagtacagtggcaaaaaggagaaggagccaacagggggcaatgagagctctggagcaacc
tctccggtcaaccccaacgttgcagttgaatag
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