KEGG   Xenopus tropicalis (tropical clawed frog): 100124735
Entry
100124735         CDS       T01011                                 
Symbol
ercc5
Name
(RefSeq) DNA repair protein complementing XP-G cells
  KO
K10846  DNA excision repair protein ERCC-5
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100124735 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100124735 (ercc5)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100124735 (ercc5)
SSDB
Motif
Pfam: XPG_N Corona_I
Other DBs
NCBI-GeneID: 100124735
NCBI-ProteinID: NP_001096186
Xenbase: XB-GENE-960380
UniProt: A4IJ07
LinkDB
Position
2:119595632..119614172
AA seq 847 aa
MGVQGLWKLLECTGRPINAETLEGKILAIDISIWLNQAVKGARDRQGNAIQNAHLLTLFH
RLCKLLFFRIRPIFVFDGEAPLLKRQTLAKRRQRKDNASNEAKKTHEKLLRTFLKRQAIK
AALSGNKQSNDELPSFSKVRRKETDDLYILPPLEDNEKYSSEEEEGRAWEERMTQKQRLQ
EEFFANPSSVDIESEEFISLPPEVKHEILTDMKEFTKRRRTLFEAMPEDSNDFSQYQLSG
LLKKNNLNKCIDNVRKELNQQYSGEVQAQFEAEGGFLKEVETRRLVSEDNSHYILIKGIQ
SKKEEKKVDSPPQSVTYNSSQTPKTYLDLKLASARKAKSSQAASADEEPPSPRTLFAIQE
AMTENILDENWDDEKHEKPSVSVREAEGNVSPRTLQAIYQVLAEDEAGQSNKKKTVVQSE
REHKKAKVIVISSSDEEDNCLNNQGRTKAAFGVPLINRVSPSSVQCQESAVSSVLDCAHS
RSVSQVEEPSNEVNVVEMADHNLQLDNRNVPIAQDTLIVSSSTGNAENPVTLCNTIPVTS
EIPLLSVNRSIQKSVINPYNSGSFDSSRDISLQGDANKQGFSDNPVVDVLNSPFETALKS
SSALGESSNTLATQLLLSKSNKFSDPSMGQSCSNTLLKSPFETALKSSSALSESSNTPAT
QLLLSKSNKYSDASMVQGCSNTLEVTQVIQPSAGSEVKQPAEDNPPMKVLGSNDSGGVYV
PMTPESIIVSDEEICDDKKEDSDSDDSFIEVESELSNSNSQLVVKEPEDTREAATKIQPA
GESSSDCQDSSLGHGSGEPREQLNNKDSEDIRNEWQDISVVKMLYIKYDILYMALPFFNE
KLLLHIL
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgggagttcaaggactttggaagctgctggagtgtacaggaagaccaataaatgcagaa
accctagaaggaaaaatccttgctattgatatcagcatttggctcaaccaagctgtaaaa
ggtgctagagaccgacaaggaaatgctatccaaaatgctcatttactgaccttattccac
cggctttgcaagctcctattttttagaattcggcctatatttgtatttgatggagaggct
cctttgctaaagagacaaactctcgcaaagaggaggcaaagaaaagacaatgcaagcaat
gaagcaaagaaaacacatgaaaagctgctgagaacattcttgaaaaggcaagcaataaaa
gctgccttatcaggaaataagcaaagcaatgatgaactgccaagcttctccaaagttcgt
aggaaggagactgatgacttgtatattctgcctcctttggaagacaatgaaaaatacagc
tctgaagaagaggaggggagagcatgggaggaaagaatgactcaaaagcagaggctgcag
gaggaattttttgccaatcccagttctgtggatatagaatcggaggagtttatcagtctt
cctccggaggtaaagcatgaaatcctgactgacatgaaggagtttacaaaaaggagaaga
acattatttgaagccatgccagaggattcgaatgatttctcccaataccagctgagtggt
ctgctgaaaaaaaataatcttaacaagtgcattgataatgtgcgaaaagagctgaaccag
cagtactctggggaagtccaagctcagtttgaggcagaaggaggctttctgaaagaggtg
gaaacgcgtcggctggtgtctgaggacaattctcattacattctaattaaaggaattcag
tcaaagaaggaagagaaaaaagttgattctcctccacaatcagttacctataattcctct
cagactcccaaaacataccttgatttaaaattggcttctgctcgcaaagctaaatcgtca
caggctgcctctgcagatgaagagccaccttctccaaggacactttttgcaatccaggag
gcaatgacggagaacatcttagatgagaactgggatgatgaaaaacatgagaagccttct
gtctctgtacgtgaagcagaaggaaatgtatcacccaggactttacaagcaatttatcag
gttcttgcagaagacgaagcagggcagagtaataagaaaaagacagttgtgcaaagtgag
agggaacataaaaaagcaaaagtaatagtaataagcagctcagatgaagaggataattgt
ttaaacaatcagggcagaactaaagctgcttttggagtgcctttaataaacagagtttca
cccagttctgtgcagtgtcaagaatctgctgtaagcagtgtgttggactgtgcacattct
agatctgtctcgcaagtagaggaaccttccaatgaagtgaatgtagtagaaatggctgat
cataatctacaacttgataacaggaatgtccctattgcccaagatacattgattgtttca
tcttcaacaggtaatgctgaaaaccctgttactttgtgtaacacaattccagtcacttct
gaaatacctttactttctgtgaataggagtatacaaaaatctgtaattaatccttacaac
tctggcagctttgactcctccagagatattagcctgcaaggagatgctaacaagcaaggt
ttttctgacaatccagttgtggatgtattgaatagtccttttgaaactgctctgaaatct
tcatcagccttgggtgagagtagcaacacccttgctactcagttattattgtctaagagc
aacaagttctcagatcccagtatgggtcaaagttgtagcaataccctattgaagagtcct
tttgaaactgccctgaaatcctcatcagccttgagtgagagtagcaacacccctgctact
cagttattattgtctaagagcaacaagtactcagacgccagtatggttcaaggttgtagc
aataccctggaagttacacaggttatacaaccttcagcaggatcagaggtcaaacaacct
gcagaggacaatccacctatgaaagtgcttggcagcaatgattctggtggcgtgtatgtg
ccaatgactcctgaaagcataattgttagcgatgaggaaatctgtgatgacaagaaagag
gattcagattcagatgacagtttcattgaagtagaaagtgagttaagcaatagcaactcc
caacttgtggttaaggaaccagaagatactcgtgaagctgcaaccaagattcagccagct
ggagaaagttcttctgactgtcaagacagttctcttgggcatggtagtggggaaccacgt
gaacagctaaacaacaaagattcggaagacattaggaatgaatggcaagacattagtgtg
gtaaaaatgctgtatattaagtatgatatactatatatggcattgcctttttttaatgaa
aaattattgttacatatactataa

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