Xenopus tropicalis (tropical clawed frog): 100124739
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Entry
100124739 CDS
T01011
Symbol
adarb1
Name
(RefSeq) double-stranded RNA-specific editase 1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100124739 (adarb1)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100124739 (adarb1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
100124739
NCBI-ProteinID:
NP_001096190
Xenbase:
XB-GENE-954085
UniProt:
A4IIV9
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All DBs
Position
9:55369528..55424391
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AA seq
719 aa
AA seq
DB search
MKTHFELSAIRHSRNQQKYFTMDVDDDENLSSSSADVKENRMDGASAKEGSGQATGDGAQ
LSNGSEGSNSRKRPLEEGNNGHSKFRPKKRKKIPGPVLPKNALMQLNEIKPGLQYKLISQ
TGPVHAPVFIMTVEVNGQVFEGSGPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLS
VNTDFTSDQADFPDTLFNGFEKPEQSEHVFFLGSNGNESFNSANDYSLSMIGSSNFIQSP
LPTPSLFPPASGKNPVMILNELRPGLKYDFVSESGESHAKNFVMSVTVDNETFEGSGRNK
KLAKARAAQSALASLFNMHLDQTPSRQPIPSEGLQLHLPQVLADAVSRLVVDKFSDLTDN
FTSPHARRKVLAGVVMTTGTDVKDAQVICVSTGTKCINGEYMSDRGLALNDCHAEIISRR
SLVRFLYTQLELFLSTKEDQQRSIFMKSERGGFKLKDNVQFHLYISTSPCGDARIFSPHE
AGQEDQGDRHPNRKARGQLRTKIESGEGTIPVRSSSTIQTWDGVLQGERLLTMSCSDKLA
RWNVVGIQGSLLSLFVEPIYLSSIILGSLYHGDHLSRAVYQRISDIEDLPHLYALNKPLL
SGISNAEARQPGKAPSFSVNWAVGDSGLEVINATTGKDEMGRASRLCKHALYSRWMRIHA
KLSSSVRCKIGKLNVYHDTKHSAVEYQSAKECVFKVFQKSGLGAWVKKPIEQDQFSLNV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacatttcgagttgagcgctatccgccattcaagaaaccagcaaaagtatttc
acaatggatgttgatgatgacgagaatctgagttcaagcagcgccgatgttaaggaaaat
cgcatggatggagcttcagcaaaagaaggaagtggccaagccaccggggatggggctcag
ctttccaatgggagtgagggaagcaacagcagaaaacggcctttagaagaaggcaacaat
ggccattccaagttccgtcctaagaagaggaagaaaattccaggccctgtgttgccaaaa
aatgctctaatgcaactgaatgaaattaagcctggcttacagtacaaacttatttctcag
acaggacctgtccatgcacctgtctttattatgactgttgaagtaaatgggcaagttttt
gaaggttcaggacctactaagaagaaggctaaacttaatgctgccgagaaggctttaagg
tcatttgtgcaattcccaaatgcatcagaagctcatctagcaatgggcagaactctgtct
gttaatactgattttacctctgaccaagcggactttccagatactctgtttaatggattt
gaaaaaccagaacagtccgagcatgtttttttcttgggctctaatggaaatgaatccttt
aattctgcaaatgactatagcttatcgatgattggaagcagtaattttattcagtctccc
cttccaacaccatctttgttcccaccagctagtggaaaaaatcctgtaatgattttaaat
gagcttcgtcctggccttaaatacgactttgtctcagagagtggtgaaagtcatgccaag
aactttgtgatgtctgtaactgtagacaatgaaacatttgaaggatctggaaggaacaag
aagcttgcaaaggcgagagcagcacagtctgcccttgcatcgctttttaacatgcacttg
gatcagaccccatccagacagcctattccaagtgaaggcctacaattacatttaccccag
gttctggctgatgctgtttcccgcttggttgtggacaaattcagtgacttgactgataat
tttacatcaccacatgcacgtcgtaaagttcttgctggagttgtcatgacaacaggaaca
gatgttaaagatgcccaagtcatatgtgtttccactggaactaagtgtattaacggggag
tacatgagtgatcgaggccttgctctaaatgattgccatgctgaaattatatctcgcagg
tcgctagttcgatttctctacacacagcttgagctgtttttaagcaccaaggaagaccag
caaaggtctatatttatgaagtcggaacgtggaggatttaagcttaaggataatgttcag
tttcatctgtatattagtacatcgccctgtggagacgctcgtattttctcaccccatgaa
gctgggcaggaagaccaaggagatcggcatcctaaccggaaagcaagagggcagcttcgt
accaaaatagaatctggagaaggcaccataccagttcgatcaagcagtaccatccagaca
tgggatggggttttacaaggagagagattgcttacaatgtcctgcagtgacaagttagca
aggtggaatgttgtaggaatccagggatccctgctcagtctgtttgttgaaccaatttac
ctgtcaagtattatcttgggtagcctatatcatggtgaccacctgtcaagggctgtctac
cagcggatatcggatatagaagatttaccccatctttatgcactcaataaacccttatta
agtggaataagcaatgctgaagcacgacagcctggcaaagcccccagcttcagtgtgaac
tgggcagttggagactcaggccttgaagttattaatgctactacaggcaaagatgaaatg
gggcgtgcatcgcgcttatgcaagcatgctctgtacagccgatggatgagaattcatgct
aagttgtcttccagtgtgagatgtaaaatcgggaaacttaacgtttaccatgataccaaa
cattctgcggtagaataccagtctgcaaaagaatgtgtcttcaaagtctttcagaagtca
ggactgggagcctgggttaaaaaacccatagagcaggaccagttttctctaaatgtttaa
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