Xenopus tropicalis (tropical clawed frog): 100124791
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Entry
100124791 CDS
T01011
Symbol
usf1
Name
(RefSeq) upstream transcription factor 1
KO
K09106
upstream stimulatory factor
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100124791 (usf1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
100124791 (usf1)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HLH
bHLH_ILI
Motif
Other DBs
NCBI-GeneID:
100124791
NCBI-ProteinID:
NP_001096236
Xenbase:
XB-GENE-5918718
UniProt:
A4IH39
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All DBs
Position
8:complement(146837503..146844073)
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AA seq
309 aa
AA seq
DB search
MKGQQKVAEIEEGSVRVQEGAVATGEDPTSVAIASIQSAATFSDPSVKYVFRTENGGAQV
MYRVIQVAEGQLDGQTEGTGAISGFPATQSMTQAVIQGAFTSDDAGETDASGAETHYTYF
PTAVTDSNSSVGGSAATVVTAQNSDALLGQAGSAGTGQFFVMMSSQDVLQGGSQRSIAPR
THPYSPKSDGPRATRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKG
GILSKACDYIQELRQSNLRHSEELQNLDQLQMDNEVLRQQVEDLKNKNLILRTQLRHHGV
EIIIKSDSR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcagcagaaagtggcagaaattgaagaaggaagcgtccgggtgcaggaaggc
gccgtggcaacgggggaagatcccaccagtgtggcaattgcaagtatccaatcagctgcc
accttctcggatcccagcgtgaagtatgtgttccgcactgagaacggaggggcgcaggtg
atgtatcgggttatccaggtggcagaggggcagctggatggacagacggagggcactggg
gcaattagtggcttcccagccacccagtctatgacccaggccgtcatccagggggcattt
accagcgacgatgcgggggagacggacgcctcgggggcagagactcactacacttacttc
cccaccgccgtcaccgactccaacagttccgtgggtgggtcggccgctaccgtggtaacc
gcccagaatagtgacgctctgctggggcaggcggggtccgcaggcacgggtcagttcttt
gttatgatgtcatcgcaagacgttctgcaaggcgggtcccagagatccatagcgccaaga
acccatccgtattctccaaagtctgacggccctcgggctactagggatgagaaacggcga
gcccagcacaatgaggtggaacggcgccggcgggacaagatcaacaactggatcgttcag
ctctcgaaaatcatccctgactgctccatggagagcactaagtctgggcagagcaagggg
gggatcctatccaaggcctgtgattatatccaggagctgcgccagagtaacctgcgccac
tcggaggagctgcaaaacctcgaccaattgcagatggacaatgaggtcctcaggcagcag
gtggaagatctgaagaacaagaacctgatccttcggacccagctgcgccatcacggggtg
gagattatcattaaaagtgacagtcgctga
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integrated database retrieval system
