Xenopus tropicalis (tropical clawed frog): 100124917
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Entry
100124917 CDS
T01011
Symbol
opn1lw
Name
(RefSeq) long-wave-sensitive opsin 1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xtr04030
]
100124917 (opn1lw)
G protein-coupled receptors [BR:
xtr04030
]
Rhodopsin family
Vision
Opsin
100124917 (opn1lw)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
Cytochrom_B_N_2
7TM_GPCR_Sru
TctB
7TM_GPCR_Srsx
MpPF26
Motif
Other DBs
NCBI-GeneID:
100124917
NCBI-ProteinID:
NP_001096331
Xenbase:
XB-GENE-955009
UniProt:
A4IHY8
LinkDB
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Position
8:32348735..32353756
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AA seq
365 aa
AA seq
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MASHWNEAVFAARRRNDDDDTTRSSVFTYTNSNNTRGPFEGPNYHIAPRWVYNISSLWMI
FVVLASVFTNGLVLVATLKFKKLRHPLNWILVNMAIADLGETVIASTISVCNQIFGYFVL
GHPMCILEGYTVSVCGIAALWSLTVIAWERWFVVCKPFGNIKFDGKLAATGIIFSWVWAA
GWCAPPIFGWSRYWPHGLKTSCGPDVFSGSSDPGVQSYMLVLMITCCIIPLAIIVLCYMH
VWLTIRQVAQQQKESESTQKAEREVSRMVVVMIIAYIFCWGPYTFFACFAAFNPGYNFHP
LAAAMPAYFAKSATIYNPIIYVFMNRQFRNCIYQLFGKKVDDGSEVSSTSRTEVSSVSNS
SVSPA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccattggaatgaggcagtttttgctgctcggaggaggaatgatgatgatgac
acaacaagaagtagcgttttcacatatacaaacagcaacaacacaagaggtccatttgaa
ggcccaaattaccacattgctccacgatgggtctataacatctcttcactgtggatgata
tttgttgttttagcttctgtgttcacaaatggcttggtcttggttgccaccttaaaattc
aagaaacttcgccaccctttgaattggattcttgtcaatatggctattgcggatcttgga
gagacagtcattgcaagtactattagtgtatgcaaccagatttttggttacttcgtgctc
gggcatccgatgtgtatcttagaaggctacactgtttcagtctgtggtattgctgctcta
tggtccttgactgtcattgcctgggaaagatggttcgtggtctgcaaaccttttggaaac
attaaatttgatggaaaattggcagctactggtataattttctcttgggtttgggctgca
ggctggtgtgcacccccaatattcggatggagcaggtattggcctcatggcttgaagaca
tcgtgtggtccagatgtattcagtggcagctcagaccctggagtccaatcatacatgctt
gtccttatgattacatgctgtattataccattagctatcattgtcttgtgttatatgcat
gtatggctgaccattcggcaggtagcacagcagcagaaggaatcagaatctactcagaaa
gctgaacgagaagtatcccgtatggtggtagtgatgatcatcgcttatatcttctgctgg
gggccctacactttctttgcttgttttgctgctttcaacccaggttacaacttccaccca
cttgcagctgcaatgcctgcctactttgccaagagtgccacaatttacaatccaattatc
tatgtgttcatgaacagacagttccgaaactgtatctatcaactgtttggcaaaaaggtc
gacgatggatcagaagtgtcctctacttccagaacagaggtgtcttctgtctccaactct
tcagtgtctcctgcataa
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integrated database retrieval system
