Xenopus tropicalis (tropical clawed frog): 100124929
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Entry
100124929 CDS
T01011
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100124929 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100124929 (gtf2f1)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100124929 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
100124929
NCBI-ProteinID:
NP_001116271
Xenbase:
XB-GENE-974834
UniProt:
B1H3B7
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Position
3:140875785..140885608
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AA seq
522 aa
AA seq
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MASLGTSGQSVTEYVVRVPRNPNKRYSLMAFNAADKVDFSTWNQARMERDLSAKKMYQDE
EMPESGAGSEYNRKQREESRRKKYGIILKEFKLEDQPWLLRVNGKAGRKYKGVKKGGVTE
NASYYIFTQCADGAFEAFPVSNWYNFTPLAKHRTLTAEEAEQEWERRNKVLNHFTIMQQR
RLKDQVGDDDEEEGGGKQEKGGKGKKKKKKSDLKIHDLEDDLDMSSSESEDSDEEGERRT
KPQKKAPAKGKKKKKQKSDDEALEDSDDGDFEGQEVDYMSDESSSDEELPGKIKPAKEEE
GPKGLDEQSESSEESEEEKAEEEEEEEKKAPTPQDNKKKKKEDSSDESETSEDSDIDGAS
SSLFMQKKKTPSKKDKKGGSNSSSRGNSRPGTPSPDTGNTSSTLRAAASKLEQSKRGAVS
NTPAAKRLKMESGPQNTSGKSTPQPQSGKSTPSSGDIQLTEDAVRRYLTRKPMTTKDLLK
KFQTKKTGLSSEQTVNVLAQILKRLNPDRKVVHDKMHFYLKE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgggcaccagtggccagtctgttacagagtatgtggtgcgtgtacccagg
aatccaaataagcggtacagtctcatggcatttaatgctgcggataaagtggatttctcc
acgtggaaccaggctcgtatggaacgtgacctgagtgccaaaaagatgtatcaggatgaa
gagatgcctgaatctggggctggcagcgagtataaccgcaaacagagggaggagtccagg
agaaaaaaatacgggatcattttaaaggagttcaaactagaggatcagccttggcttctg
cgagtgaatggaaaggcaggacgcaagtataaaggcgtgaagaagggcggagtgacggaa
aatgcctcttactacatattcacacagtgcgcagatggagcatttgaagcatttccagtc
tccaactggtacaatttcactccacttgccaagcatcgcactctgacggccgaggaggcg
gagcaggagtgggaaaggcgcaacaaagtcctcaatcactttaccattatgcagcagcgt
cgcctgaaggaccaggtgggagatgatgatgaagaggaaggtgggggaaaacaggaaaaa
ggaggaaagggcaagaaaaagaagaaaaaaagtgacctcaaaatccatgatcttgaggat
gaccttgatatgagctccagtgaaagcgaggacagcgatgaggagggcgagcgtcgcaca
aagccccagaagaaagctccggccaagggcaagaaaaagaagaagcagaagtcggacgac
gaggctctagaggacagcgacgatggggattttgaggggcaggaagtagattacatgtcg
gacgagagcagctctgatgaagagcttccagggaagatcaaacccgccaaagaggaggaa
ggccctaaaggattggatgagcagagtgagagcagtgaggagagcgaggaggaaaaggca
gaggaagaggaagaagaagagaagaaggcccccaccccacaggataataagaaaaagaag
aaagaagacagcagtgatgagtctgagacttctgaggacagtgatattgatggagcctca
tcatccctctttatgcagaaaaagaagaccccatccaagaaggataagaaaggcggctcc
aacagcagctcccgggggaacagcaggcccggaaccccgtctcctgacacagggaacacg
tcgagcaccctgagagctgcagcaagtaaactagaacaaagcaaacgaggagcagtgtca
aacactcctgcggcgaaacgtctcaagatggaatccgggccgcaaaacacttcaggaaaa
tccacccctcagccacagtccgggaagtcgacccccagcagcggggacattcagctgacc
gaggacgccgttcgccggtacctgacccgcaaacccatgacaactaaagaccttctgaag
aaattccaaaccaaaaagacaggtctgagcagcgagcagacagtcaatgtgctggcccag
atcctaaagagactgaacccagaccggaaggttgtgcacgacaagatgcacttctaccta
aaggagtga
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