Xenopus tropicalis (tropical clawed frog): 100124945
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Entry
100124945 CDS
T01011
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100124945 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100124945 (hspd1)
03110 Chaperones and folding catalysts [BR:
xtr03110
]
100124945 (hspd1)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100124945 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100124945 (hspd1)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100124945 (hspd1)
Messenger RNA biogenesis [BR:
xtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100124945 (hspd1)
Chaperones and folding catalysts [BR:
xtr03110
]
Heat shock proteins
HSP60 / Chaperonin
100124945 (hspd1)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100124945 (hspd1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100124945 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
100124945 (hspd1)
Exosomal proteins of breast cancer cells
100124945 (hspd1)
Exosomal proteins of colorectal cancer cells
100124945 (hspd1)
Exosomal proteins of bladder cancer cells
100124945 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
K-cyclin_vir_C
DUF2913
DUF5398
Motif
Other DBs
NCBI-GeneID:
100124945
NCBI-ProteinID:
NP_001096355
Xenbase:
XB-GENE-980059
UniProt:
A0A803KIS9
LinkDB
All DBs
Position
9:complement(46506950..46536739)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRIQRILRHAKPASRALSLSLSRQYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMMAVDAVIKELKNQSKPVTTPEEIAQVATISANGDQ
EIGKIISDAMKRVGRRGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAISSGGVVFGEEGLTLNIEDIQPHDFGKVGEVIVTKDDTMLLKG
KGDKAQIEKRIQEIHEQLESTNSEYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALEALNPANEDQRVGIEIIRRTLKIPAMTIA
KNAGVEGSLVVEKIIQSPVEIGYDAMHAEFVNLVEKGIIDPTKVVRTALMDAAGVASLLT
TAEAVVTEIPKEEKDGGMAGMGGMGGMPGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatacaaagaattctgcgacatgcaaagccagcttccagagcgctgtccttg
agcttgagccgccagtatgccaaagatgttaagtttggggctgatgcaagagcacttatg
cttcaaggggttgatctcttggctgatgcggtggctgtgacaatgggacccaagggaaga
actgttattatcgaacaaagctggggaagtccaaaagtaaccaaagatggcgtaacagtt
gcaaaagcaattgatctgaaagataaatacaaaaacataggtgccaaactagttcaagat
gtagctaacaacacaaatgaagaagcaggtgatggaacaaccactgcaactgtccttgca
aggtctatagctaaagaaggctttgaaaagataagcaaaggtgcaaatccagtagaaatt
agaagaggtgtaatgatggcagtagatgcggtcatcaaagagttaaaaaatcagtcaaaa
cctgttacaacaccagaagagatagctcaggttgctaccatatcagcaaatggtgatcaa
gaaattggcaaaataatatcagatgcaatgaaaagagttggtcgtagaggtgtaattaca
gttaaggatggcaaaactcttcatgatgagctggaaataattgaaggcatgaaattcgac
agaggctatatttcaccatactttataaatacagctaaaggccagaaatgtgaattccag
gatgcatatcttctccttagtgagaaaaaaatttccagtgttcagtctattgtgcctgct
cttgaaattgctaatgctcaccgtaaaccgctagttataatagctgaagatgttgatgga
gaggcgttaagcacattagtgttaaacaggctgaaagttgggctgcaagtagttgccgta
aaagctccaggttttggggataaccgaaaaaaccagcttaaggatatggcaatttcatct
ggtggggtggtgtttggggaggagggtctcaccctaaatattgaagatattcagccccac
gattttggcaaagtaggagaagttattgtaactaaagatgacactatgttattgaaagga
aagggtgacaaagctcagattgagaaacgtattcaagaaattcacgaacagttggaatct
acaaacagtgaatatgaaaaggagaagttaaatgagagattggctaagctgtctgatggt
gttgctgtaataaaggttggtgggacaagtgatgtcgaagttaatgaaaagaaagataga
gtaactgatgcattaaatgccacccgtgcagctgtggaagaaggcattgttttgggaggg
ggctgtgccttgctccgatgcatcccagcactggaagccctaaacccagccaatgaagac
caaagagtgggcattgaaatcataaggagaacactgaagattcctgcaatgaccatcgca
aaaaatgcaggtgttgaaggatcattagtggtagaaaagatcattcagagtccagttgag
attggatatgatgccatgcatgctgaatttgttaacttggtggaaaaaggcattattgac
cccacaaaggttgtgaggacagctttgatggatgctgccggtgttgcttcactcttgaca
acagctgaagcagttgtgactgaaattccaaaagaagaaaaagatggtggcatggccgga
atgggaggaatgggaggcatgcccggtggtatgggaggtggaatgttctaa
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