Xenopus tropicalis (tropical clawed frog): 100124949
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Entry
100124949 CDS
T01011
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B precursor
KO
K16360
netrin-G3 ligand
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecule (CAM) interaction
xtr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100124949 (lrrc4b)
04517 IgSF CAM signaling
100124949 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100124949 (lrrc4b)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
NGL family
100124949 (lrrc4b)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
DUF7617
CBM_35
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
100124949
NCBI-ProteinID:
NP_001096358
Xenbase:
XB-GENE-5945982
UniProt:
A4II54
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All DBs
Position
7:133348931..133455608
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AA seq
641 aa
AA seq
DB search
MVPHLCTCRILGLKIFRMIWKQALLLLWVTSLALGGISPTSCPAACTCSNQASRVACTRR
ELMEVPESISVNTRYLNLQENIIQVIKTDTFKHLRHLEILQLSKNLIRKIEVGAFNGLPN
LSTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKKL
EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLEMIRPGSFQGLTSL
RKLWLMHAHVTIIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHC
NCDVLWLSWWLKETVPNNTTCCARCHSPPNLKMRYIGELDQSHFTCYAPVIVEPPTDLNV
TEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYT
CMVTNSAGNTTATATLNVSAAADPATTDYTYFTTVTVETMDSNVEETKPTDKEPGPTPTV
RWGITYSTTSLTPRSTRSTEKTFTIPITDVTGNIMKDLDDVMKTTKIIIGCFVAITFMAA
VMLIAFYKLRKQHQLHKHHGPTRTIEIINVEDEIPATAPGDNHMALPAIEHDHLNHYTAF
KAHYNNNTGTLNCAKNPMLNSIHEPLLFKSSSKENVQETQI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggttccccacctttgcacctgcaggattctgggtctgaagatctttagaatgatttgg
aagcaagctctacttctcttgtgggtcacatctctggccctggggggtatttcccctact
tcctgccccgcggcgtgtacctgcagtaaccaggccagccgcgttgcctgtacccggagg
gaactgatggaagtgcccgagagcatctccgttaatacgcgatatctgaatcttcaggag
aatattatccaggtcattaagacggacactttcaaacaccttcgtcacctggaaattctt
cagctcagcaaaaacctgatccgtaagatcgaggttggagcttttaatggactcccaaac
ctgagcaccctggaactttttgataatcgcttgaccactgtccccactcaagccttcgag
tacctgtcgaagctgagagagctgtggttaaggaacaacccaattgagagcataccctcc
tatgcgttcaaccgggtcccttccttgcggagactggatttaggggaacttaaaaagttg
gagtatatctcagaagctgcctttgaaggtcttgtcaacttgcgctatctcaacctaggc
atgtgtaacttgaaggacatacccaaccttacggctttggtgagactggaggaactggaa
ctctctgggaacagactggaaatgattcgccccggctctttccaagggctgaccagtctc
aggaagctgtggctgatgcatgcacacgttaccatcatagagcgcaatgctttcgatgac
ttgaaatctctggaggaactgaatctctctcataacaatttgatgtctcttccccatgac
ctgtttacgcctctccaccgccttgagcgagtgcacctcaaccacaatccctggcactgc
aattgtgatgtattgtggctaagctggtggctcaaagagaccgtgcccaataatacaaca
tgttgtgcccgttgccattcgcctcccaacttaaagatgaggtacattggggagctagat
cagagccatttcacctgctatgcccccgttatagtggaaccccccactgaccttaatgtg
acagagggcatggcggctgaactcaagtgccgaactggtacatcaatgacctctgtgaac
tggttgacaccaaatgggaccttgatgacccacggctcttacagggtgcgcatttcagtc
cttcacgatggcacactcaattttacaaatgtaaccgttcaagatacgggccagtacaca
tgtatggtgaccaattcagccggaaatactacggctactgccaccctcaacgtatctgct
gctgctgatcctgccaccaccgactatacatattttactaccgtgactgttgaaactatg
gactcaaacgtggaggagacaaaacctactgacaaggagcccggccccaccccgacggtg
cgatggggaataacctactccaccacctcgctcactccgcgtagtacacgttctacggaa
aagaccttcaccatccccattacagacgtgacggggaacatcatgaaggatctggacgat
gttatgaagaccactaaaattatcataggatgttttgtagcgataacttttatggcagct
gttatgctcattgcattttacaaactccgaaagcagcaccagcttcacaagcaccacggg
ccgacgcggactatcgaaataatcaacgtggaagacgagataccggccacggccccgggg
gacaatcacatggccctaccggccatcgagcacgaccacctcaatcattacactgcgttt
aaggcccattataacaacaatacggggacccttaactgtgccaaaaaccccatgctcaac
tccatccacgaaccccttttgtttaagagcagctcaaaggaaaacgttcaagagacgcaa
atttag
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