Xenopus tropicalis (tropical clawed frog): 100125003
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Entry
100125003 CDS
T01011
Symbol
ttc26
Name
(RefSeq) intraflagellar transport protein 56
KO
K19685
intraflagellar transport protein 56
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100125003 (ttc26)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100125003 (ttc26)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_14
TPR_2
TPR_8
TPR_9
SRP_TPR_like
DUF6339
Motif
Other DBs
NCBI-GeneID:
100125003
NCBI-ProteinID:
NP_001096401
Xenbase:
XB-GENE-1002214
UniProt:
A4III8
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Position
4:114726777..114750720
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AA seq
554 aa
AA seq
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MMLSRAKPAVGNEVQQIDKKKKKGKKVPRLDELLAQRDFTGAITLLEFKRQVGESEEDTE
LWIGYCSFHLGDYKRSLEVFKALSQQEGCNPDVWVNLACTSFFLGMYKEADEAANKAPKS
RLQNRLLFHLAHKFNDEKRLMVFHQNLQDVIEDQLSLASIHYMRSHYQEAIDIYKRILLE
NRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQQVPDSTIALNLKACNHFRLYNGKAAEA
ELKGLMDSTSSPIEFAKELIKHNLVVFRAGEGALQVLPPLVDVIPEARLNLVIYYLRQDD
VQEAFNLIKDLEPSTPQEYILKGVVNASLGQELGSRDHLKIAQQFFQLVGGSASECDTIP
GRQCMASCFFLLRQFDDVLIYLNSIKSYFYNDDTFNFNYAQAKAAVGNYKEAEEVFLLIQ
NEKIKNDYTYLSWLARCYIMNKKPRMAWELYLKMETSGESFSLLQLIANDCYKMGHFYYA
AKAFDILERLDPSPEYWEGKRGACVGIFQMILAGREPKETLREVLNLLRSTGNTQVEYII
RILKKWGKENRVPV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatgctttcaagagccaaaccggctgtaggcaatgaggtacagcaaatagataagaaa
aagaaaaaaggaaaaaaagttccaagactggatgagctgcttgcacagagagactttact
ggagcaatcacattacttgagtttaagcgccaggttggggaaagtgaagaggacacagaa
ttatggattggttactgttcatttcatcttggagactacaaaagatctctggaggtattt
aaggctctgagccaacaagaagggtgtaatcccgatgtctgggtgaatctggcttgcacc
agctttttcctaggaatgtacaaagaggcagacgaagcagccaataaagcacccaaaagt
cgccttcagaatcgattgcttttccatctggctcataagttcaatgatgagaagagactc
atggtgtttcaccagaaccttcaggatgtcattgaggatcagctaagtctggcatctatt
cattacatgcgatcacactaccaggaggccatagatatttacaagaggatactgctagaa
aacagggatttccttgctctgaatgtctatgtggctttgtgctactataaacttgattat
tatgatgtttcccaagaagtacttgctgtatatttacagcaggttcctgacagcacaata
gctctgaatctcaaagcctgcaatcatttccgactgtataatggaaaggcagctgaggca
gaattgaaaggtttgatggacagtacctcgtcaccgattgaatttgccaaggagctgatt
aaacacaatcttgttgtgtttcgtgcaggtgaaggtgcactgcaggtattaccacccttg
gttgatgtgattccagaagcacgtttaaatttagtgatttattatctcaggcaagatgat
gttcaagaagcctttaacttgattaaggatttggaaccatcaactccacaggaatatata
ctaaagggtgtagtaaatgcttcccttggccaggaattaggctcgagagaccacctgaaa
attgctcagcagttcttccagcttgtgggaggctctgccagtgaatgtgatacaattcct
gggaggcagtgcatggcctcttgcttttttcttttgcgccaatttgatgatgttttaatc
taccttaactctataaagagttacttctataatgatgacacctttaactttaattatgct
caagccaaagcagcagttggaaattacaaggaggctgaggaggttttcctcttaattcag
aatgagaagattaaaaatgactacacatatctaagctggcttgcccgttgctatattatg
aacaagaaaccaaggatggcctgggagttatacctaaagatggaaacctcaggagagtca
tttagcctcctacagctaattgccaatgattgctacaagatgggccacttctattatgct
gccaaggcatttgatatactagaaaggctggaccccagtccagaatactgggaggggaag
agaggagcatgtgtgggaatctttcagatgattttagcaggccgtgaacccaaagagaca
ctacgggaagtgctgaatttgctaaggagcacagggaatacacaagttgagtacattatc
cgaatcctgaagaaatggggcaaggagaatcgagtaccagtttga
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