Xenopus tropicalis (tropical clawed frog): 100125065
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Entry
100125065 CDS
T01011
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100125065 (dennd4b)
Membrane trafficking [BR:
xtr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
100125065 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
SPA
PPR
Motif
Other DBs
NCBI-GeneID:
100125065
NCBI-ProteinID:
XP_031746823
Xenbase:
XB-GENE-5886552
UniProt:
A0A803JGY4
LinkDB
All DBs
Position
8:complement(144375648..144404205)
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AA seq
1503 aa
AA seq
DB search
MEEGLPKLVDYFVVAGLTPASRPLEEENRQRSIRTTELVTDVAVIVKAQGEEVPQGFTCI
ETTPGGHSADLNSGLLTNQQMYLCYRRGRDKPPITELGVHYDGKEPLRPGFQVIDTTPYS
HSANLSSGGPGNQRAFLMFKRAPESMGLNSLGVMDICIINPSKGESTPNTFCRVDRNLNT
SMFGPALFLCYKKGTAKTHSLVYEAGVLSRFPSADSETFPLPEMVATFCLPMGATIESWP
INTKYHMPVFSTFVLTGASGEKVYGAAIQFHEQYPRGCLSEKQNQSLGLLSVVDKRPVTN
KSVQTKKSICVLSHWPFFDVFQKFLTFIYRYSISGPHVLPIEKHISNFMFNVPFPSPQRP
RILVQMSPYDNVLLCQPVSSPLPLSGASYVTLLQNLGPETAVTLLLAVLTEHKLLIHSQR
PDVLTSVGEALVSIIFPLRWQCPYIPLCPLTLSDVLCAPVPFIVGIHSSYFDLHDPPQDV
LCVDLDTNTLFQSEEKKVPSVRSLPRKPCKVLLGTLSDLHKQLDEMYNKPMEEATLEFLL
KDYDLIYGRRTQLELDVRAAFLRFMACLLKGYRSFLLPITQAPSERTRDSSNLFNVEGFR
KSRDRAHQKFYSQMLKTQMFTQFIEDCSFVSDRHACLEFLDNCIEKVQIDGEKMEDLHLV
ELDESHRSEHTVFIMPAEEPHEPGSGELPAQYMYESFPVLKWELFDLPQDLLMAPPNQSK
SSAPSSPAPRRTKQEIKMAQRVAQKYSAMPDMWAKCLLGHCYGLWFIYLPTFVRATPSKV
RALQTAYDALKQMENKKVVLPDEVCYRVLMQLCGQYGEPVLAVRVMLEMKKAGIVPNIIT
YGYYNKAILESKWPSSSQSGRLRWAKLRNVVLGAAQFRQPLKRKRRQAGLSLSQTESHLP
RNCASELPPRLSLLRQATWAGSSHREFHESCAGKLVKSWSVSGAGSDGDMVESSLAHMME
DAEGMKMGRRGEGSPSLRRPCGTPLALGPSENGSLSNVSLQTDATGSDVAVTSEDSEALM
TESSTEALPCRPARDLGDSSSTGTNGKRHSLAGKIQQLLSPARKPGRVTLLRKKSSMSEK
PSPLSFPGDQSWRSYKESIGRPESTASEVSKSSVSLGSEVDLSDTSVCSFTLHKSTDRLT
DGGQEAPAAEVMLSGCSLCPVCHSLVYDEDIMAGWTSDDSNLKTVCTFCGKYFVPLLNVR
VTDLQSRHSASKDSSASPQPSTNGDSPVPGGAGPVLSDRFQCLVLDDQGTVRPPCNGYTD
TQLQLPGPSASSEVVTVAYLCPLVLRKELESLLENEGGDVLSQPELVNSHPIIYWNLVWY
FKRMALPSNLLQLVLASKHVRQQSQVLEVPQVRVRLLWDVLMQDPERWPPLYVLWKLNRN
LPTHLHSWNHAHPFTLEVLEKILNFVGLNEVHKAISLIIGILQEQPSPPQSMQRGIYREL
LLLTLAALGKDHMDIGAFDNKYKTAFKKLSSSLGKEELRRRRAQFPTPKALDCRRTFGAT
LDC
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggaagagggactgcccaaactggtggattactttgtagtggccggcctgaccccggcg
tctcggcccttggaggaagagaaccgccagcgctctattcgcaccacagagctggtcact
gacgtggcggtcattgtcaaggcgcagggggaggaggttccgcaggggtttacctgtata
gagaccacccccggggggcactcggccgatctgaattccggcttactcaccaaccagcag
atgtacctgtgctaccgcaggggcagagacaagccccctatcaccgagttaggagtgcac
tatgacggcaaagaacctctccgcccgggcttccaggttatcgacaccactccgtacagt
cactctgccaacctgagctcggggggccccgggaaccagcgagccttcctgatgttcaaa
cgggcccccgaatccatggggctgaatagtctgggggtgatggatatctgtatcattaat
cccagcaagggggaaagcacccccaacaccttttgccgagtggataggaacctcaataca
agtatgttcgggccggctctgttcctctgttacaagaagggcacggctaagacccacagc
cttgtgtatgaggcaggggtgctcagccgcttccctagtgccgacagtgaaacgtttccc
ttgcccgagatggtggcgaccttctgtctgccaatgggtgccaccattgagagctggcca
atcaacactaagtatcacatgcccgtcttctccacctttgtgctgactggggcttctggg
gagaaggtatatggcgcagccatccagttccatgagcaatacccccgggggtgcctgagc
gagaagcagaaccaatccctggggcttctgagtgtggtggacaagcgccccgtgaccaac
aaatctgtccagaccaagaagagcatctgtgtcctctctcattggcccttcttcgacgtc
ttccagaagttcctcactttcatttatcgatactccatctccggcccccacgtccttccc
attgagaaacatatctccaacttcatgttcaatgtccccttcccgtccccacagcggccg
cgcattttggttcagatgtccccctatgataacgtcctgctgtgccagccagtatcctct
cctttgcccctcagcggagccagttacgtgactctcctgcagaacctgggccccgagacc
gccgtgaccctactcctcgccgtgctgaccgaacacaaactgctcatccactcccagcgg
cccgatgtgctgaccagcgtgggcgaggctttggtgtcgatcatcttcccgctgcggtgg
cagtgcccatacatcccgctgtgccccctcaccctctccgatgtgctttgtgcccctgtt
ccgttcatcgtgggcatccactccagctacttcgacctgcacgacccgccccaggatgtt
ctgtgtgtggatctggacaccaacaccctgttccagagtgaagagaaaaaggtcccatcg
gtgcgctcgctgccccgcaaaccctgtaaggtgctactgggcaccctgagcgacctgcac
aaacagctggacgagatgtacaacaaacccatggaggaggccacactggagttcctgctg
aaagactacgatctgatctacggacgccggacgcagttggagctggacgtacgcgccgcc
ttcctgaggttcatggcatgcttattaaaggggtaccgctccttcctgctgcccatcacc
caggccccctctgaacggacgcgcgactccagcaacctgtttaacgtggagggtttccgg
aagtcgcgggaccgggcgcaccagaagttctactcgcagatgctgaagacacagatgttc
acacagtttatagaggactgctcctttgttagcgaccggcacgcctgtctcgagttcctc
gacaattgcatagaaaaggtgcagatagatggggagaagatggaggacttacacctggtg
gagttggacgagtcccaccgcagcgagcacactgtgttcatcatgccagccgaggaacct
catgaacctggcagtggggagctgcccgcccagtacatgtatgagagcttcccagtcctc
aaatgggagctgttcgacctaccccaagatctactgatggctccacccaaccaatccaag
agcagcgccccgagcagccccgccccacgccggaccaagcaggaaataaaaatggctcag
cgcgtggcccagaagtactcagccatgcccgacatgtgggccaagtgcctgctgggccac
tgctacggcctgtggtttatttacctgcccacgttcgtgcgtgccacccccagcaaagtg
cgagctcttcagaccgcctacgatgccctgaagcagatggagaataagaaggtggtcctg
cctgatgaggtgtgttaccgggtcctgatgcagctgtgcggccagtacggggagccggtc
ctagcggtgcgggttatgctggaaatgaaaaaagctggcattgtgcccaacatcatcacc
tacggatactacaataaggccatattggaaagcaaatggccctcgagcagtcagagcggg
cgcctacgctgggccaagctgcgcaatgtggttctgggagccgcacagttccgccagccc
ctcaaacggaaaaggagacaggccggactcagcctttcccagactgaaagccatttgcca
aggaactgcgcctctgagctgcccccgcggctgagcctcctgcgccaagctacatgggcg
gggagctcacacagggaattccatgagagctgcgccgggaaactggtaaagagctggagc
gtcagtggcgccgggagtgatggcgacatggtggagagctcgttggcgcacatgatggaa
gatgcggagggtatgaagatgggcagaagaggagagggaagcccgtcgctaaggaggccg
tgtgggacccccctggccctgggcccctcggagaacgggagcctatccaacgtcagtctg
cagaccgatgccaccggcagcgacgtggctgtaacttcagaagactcggaagccctgatg
acggagagttccacggaggccttgccctgccggccggccagagacctgggagactcctcc
tccaccggtaccaacggcaaacggcacagcttggccggcaagatacagcagcttctctcc
ccggcccggaagcctggaagggtcacgttactgcgcaaaaagtcctccatgtctgaaaaa
ccgtcccctctcagcttccccggggatcagagctggaggagctacaaggaaagcattggg
cgcccagagtccacggcctccgaggtgagtaagagctccgtctctctgggaagcgaagtg
gacttgtccgacacctccgtctgcagcttcaccctacacaaatccaccgaccgactgacc
gacggggggcaggaagcgccggcggcagaggtgatgctgtccggctgctccctgtgcccg
gtgtgccactccctggtatacgacgaggacatcatggccggctggacctccgatgactcc
aacctgaaaaccgtctgcaccttctgcggcaaatactttgtgcccctcctgaacgtcagg
gtcaccgacctgcagagccggcacagtgcttccaaggactcctctgcctccccccagcct
tccacaaatggagactccccagtccctgggggggcggggccagtgctgagcgaccgcttc
cagtgtttggtgctcgatgaccaagggactgtgcgccccccgtgcaatggatacaccgac
acccaattacagctgcctgggcccagtgcgagctccgaggtggttacggtggcctacctt
tgcccgctggttctgcgcaaggagctggagagcctactggagaatgaaggtggagatgtc
ctttcccagccagagctggtcaacagccacccaatcatctactggaaccttgtgtggtac
ttcaagcgtatggcactgcccagtaacctccttcagctggtgttggcctccaaacacgtc
cggcagcagtcacaggtgctggaggtgccgcaggtgagggtgcgacttctgtgggacgtg
ttaatgcaggacccggagcggtggcctcctctctacgtcctctggaaactcaacagaaac
ctccccacccacctccattcctggaaccacgcccacccctttaccctggaagttctggag
aagatcttgaatttcgtaggcctcaacgaggttcataaagcaatttccctgatcatagga
atcttacaggagcagccctccccaccccagagtatgcagaggggaatataccgggaactg
ctactcctaacactggctgccctcgggaaggatcacatggatattggtgcatttgataat
aaatacaagacggccttcaagaagctaagcagctcattggggaaggaagaactgagaaga
agaagggcccagttccccactcccaaggcgctagactgtcggagaacctttggggccacc
ctggattgctga
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integrated database retrieval system
