Xenopus tropicalis (tropical clawed frog): 100125098
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Entry
100125098 CDS
T01011
Symbol
plcb4
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00562
Inositol phosphate metabolism
xtr01100
Metabolic pathways
xtr04020
Calcium signaling pathway
xtr04070
Phosphatidylinositol signaling system
xtr04081
Hormone signaling
xtr04082
Neuroactive ligand signaling
xtr04261
Adrenergic signaling in cardiomyocytes
xtr04270
Vascular smooth muscle contraction
xtr04310
Wnt signaling pathway
xtr04371
Apelin signaling pathway
xtr04540
Gap junction
xtr04621
NOD-like receptor signaling pathway
xtr04912
GnRH signaling pathway
xtr04916
Melanogenesis
Module
xtr_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
100125098 (plcb4)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100125098 (plcb4)
04371 Apelin signaling pathway
100125098 (plcb4)
04020 Calcium signaling pathway
100125098 (plcb4)
04070 Phosphatidylinositol signaling system
100125098 (plcb4)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100125098 (plcb4)
04081 Hormone signaling
100125098 (plcb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
100125098 (plcb4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100125098 (plcb4)
09152 Endocrine system
04912 GnRH signaling pathway
100125098 (plcb4)
04916 Melanogenesis
100125098 (plcb4)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
100125098 (plcb4)
04270 Vascular smooth muscle contraction
100125098 (plcb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100125098 (plcb4)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
100125098 (plcb4)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
100125098 (plcb4)
Endocytosis
Macropinocytosis
Phospholipase C
100125098 (plcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
PLC-beta_C
EF-hand_like
C2
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
100125098
NCBI-ProteinID:
XP_002931782
Xenbase:
XB-GENE-1010443
UniProt:
A0A8J1JLI1
LinkDB
All DBs
Position
5:26264460..26432949
Genome browser
AA seq
1205 aa
AA seq
DB search
MAKVYEFNWQKAVPSFMQDGAVFDRYEEESFVFEPNCLFKVDEFGFFLTWKSEGKEGQVL
ECSLINSIRYGAVPKDPKILSALEAVGKAEQELDGKILCVCCGTDLVNISFTYMVAESAE
LAKQWVEGLKSITHNFRANNVSPMTCLKKHWMKLTFLTNISGKIPVRSITRTFASGKTEK
VIFQALKELGLPSGKNDEIEPSAFTFDKFYELTQKICPRTDTEELFKKINGDKSDYLTVD
QLVSFLNEHQRDPRLNEILFPFFDAKRAMQIIETYEPDEELKKAGQISSHGFCRYLMSDE
NAPVFLDRLELYQEMEHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELD
CWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKDTAFVTSEYPVILSFENHCSKYQQYKM
SKYCEEIFGDLLLSKALESHPLDTGRPLPSPNDLKRKILIKNKRLKAEVEKKQLEALKSM
MEAGETATPVSILEDDIEEEIENADQEEEAHPEFKFGSELSSDDLSQKEAANIAKKMAED
AEQENNNKKGAITVEDEQAWMASYKYVGATTNIHPFLSSMINYAQPVKFQGFKVAEERNI
HFNMSSFNESVGLGYLKTHALEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVS
LNYQTPDLAMQLNQGKFEYNGSCGYLLKPDFMRRPDRTFDPFSETPVDGVIAATCSVQVI
SGQFLSDKKIGTYVEVDMYGLPTDTIRKEFRTRMVMNNGLNPVYNDEPFVFRKVILPDLA
VLRIAVYDDNNKLIGQRILPLDGLQAGYRHISLRNEGNKPLSLPTIFCNIVLKTYVPDGF
GDIVDALSDPKKFLSITEKRADQMRAMGIETSDIADVPADNTKNDKKGKTSNAKTNVTPQ
SSSEVRPSVTAAPGAGTENKKAIDIPQVKVEELKQMKAFLKQQKKQQKEIAALKKKHLKE
HSVVQKLQCTQVDKIVAQFDKEKVSHERTLEKSIKKKGASNCHEMKKETENKIQVLTSDH
KSKVKDIVAQHTKEFTEMVKAQNAEEQTLRDVHLSQQCELLKELLRGIHAQQMQQLKLTH
DRESKEMKANQAKLSMENCKAISQDKSIKNKAERERRVRELNSSNTKKFLEERKRLAMKQ
SKDVDQLLKNQQEHMENLEKQNEQHLKACHAVSQSQGKGDTADGEAGSRDGPPSSNCCVK
LQNAN
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgtatgaatttaattggcagaaggctgttccttccttcatgcaagatggg
gctgtgtttgacagatatgaagaagagtcttttgtgtttgaacccaactgcctctttaaa
gtagatgaatttggtttctttctgacatggaaaagtgaaggaaaggagggtcaagttctt
gaatgttcactcatcaatagcatacgatatggagcagtaccaaaggacccgaaaatcctg
tctgccctggaagccgttggaaaggctgagcaggaactggatggcaagatcctgtgtgtt
tgctgcggtacagatctggtgaacatcagctttacttacatggtagcagagagcgccgag
ctagctaagcaatgggtagaagggctaaaatctatcacgcataattttagagccaacaac
gtcagcccaatgacatgtctcaaaaaacactggatgaaattgacatttttaacaaacatc
agtggaaagatcccagtaaggagtattacaagaacatttgcatcaggaaaaacagaaaaa
gtcatctttcaagcacttaaagagttaggccttcccagtggaaagaacgatgaaattgaa
ccatcggccttcacctttgataagttttatgagctcacgcaaaagatctgcccccgcacc
gacacagaggaactatttaaaaaaatcaatggagacaaatctgattatttaacggtagac
caattagtgagctttctaaatgaacatcagcgagatcctcgtctcaacgagattctcttc
ccattctttgatgccaaaagggccatgcagataattgaaacctatgaaccagatgaagag
ctgaagaaagcaggtcagatatcaagtcatggcttttgcaggtatctgatgtcagatgaa
aatgcccctgtcttcctggaccgcttagaactctaccaagaaatggaacatcccttggcg
cattactttatcagttcctcccacaacacgtacctcactgggagacagtttggtggaaaa
tcatcagtggagatgtacagacaggtcctgctggccggatgcaggtgcgttgaactggat
tgctgggatggaaaaggggaagatcaggagccaataataacgcatgggaaagcaatgtgt
accgacatcctttttaaggatgtaatccaggccatcaaagacaccgcatttgtcacatca
gaatatccagtgatcctttcctttgagaaccactgcagtaaatatcagcagtacaagatg
tcaaaatactgcgaagaaatattcggcgacctcttactgagcaaggccctcgagagtcac
ccgctggacactggcagacctttaccttctcctaatgacctcaagcgaaaaatactgatt
aaaaacaagcggctgaaggccgaagtggaaaaaaaacagctagaagcactgaaaagtatg
atggaggctggagaaacagcaaccccagtcagtatcctggaagatgacattgaagaggaa
attgaaaacgctgaccaagaagaggaagcacatccagaatttaaattcgggagtgaactg
tcttcagacgacctcagccaaaaggaagctgcaaatattgccaaaaagatggctgaagat
gctgaacaagaaaataacaacaaaaagggtgctataacagtggaggacgagcaagcttgg
atggcatcctataaatacgtaggtgccactaccaacattcatccatttctgtcatcgatg
atcaactacgctcagcctgtaaagttccagggcttcaaagtggctgaagaaaggaacatc
catttcaacatgtcttcttttaacgaatcggttggactgggatatctaaagacacatgct
ctcgagtttgtaaattataacaagcgtcagatgagtcggatctaccctaaggggggccga
gtagattccagtaattacatgccacagattttctggaacgccggctgccagatggtttct
ctgaactatcagactccagatttagccatgcagctgaatcaggggaagtttgagtacaat
ggatcgtgcgggtaccttttgaagcctgatttcatgcgccgtccagatagaacctttgac
cctttctcagaaacacccgtggacggggtgattgcggcaacttgttcagttcaggtcata
tctgggcagttcttgtcagacaagaagatcgggacgtacgtggaagttgatatgtatgga
ttacccacggacactatacgcaaggagtttcgtacgcgcatggtcatgaacaatggtctg
aatcccgtttacaatgatgagcccttcgtattccgaaaggttatcttgccagaccttgct
gtgctaaggatagctgtatatgatgacaacaataaactaattgggcaaaggatactacct
ctggatggtctgcaggcagggtaccgacacatttctctccggaatgagggcaacaaacca
ctttcccttccaacaatcttctgtaacattgttttaaagacctatgttccggatggattt
ggagatattgttgatgcattgtcagatccaaagaaatttctttctattacggagaaaaga
gcagaccagatgagagcaatgggtattgaaactagtgacatagccgatgtaccagctgac
aacaccaagaatgataaaaaagggaaaaccagcaacgccaaaacaaatgtgacccctcag
agcagctctgaagtcaggccatccgttactgctgcccccggggcaggaaccgaaaataaa
aaagctatcgatattcctcaggtgaaggtagaagaattaaaacaaatgaaggcattcctc
aagcagcaaaagaaacagcagaaagagattgctgcactaaaaaagaagcacttaaaggag
cacagcgttgtgcagaagttacagtgcacacaagttgacaaaatagtggcacagtttgac
aaagaaaaagtatctcatgagaggaccttagagaaatcaatcaagaagaaaggagcaagt
aactgtcatgaaatgaagaaagaaacagaaaataaaattcaggttttaacttcagatcat
aaatccaaggtgaaagatattgtggctcagcatacaaaagagttcacagaaatggtgaaa
gcacagaacgcggaagagcaaacactccgagatgtccatttaagccaacagtgtgagctc
ctgaaagagttgctgcgggggattcatgcacaacaaatgcagcaactcaagctgacccat
gacagagaaagcaaggagatgaaggccaaccaagcaaaattgtccatggaaaactgcaaa
gccataagccaggataaatcaatcaaaaacaaggctgagagagaaaggcgagtgagggaa
ctgaatagcagcaacacaaagaagttccttgaggaacggaaaaggctggcaatgaaacag
tcgaaagacgttgatcagctgttaaaaaaccaacaagaacacatggagaacctggagaag
cagaatgaacagcatttgaaagcgtgccatgcagtgtctcaatcacaaggcaaaggagat
acagcagatggtgaagctggaagcagagatggaccaccgtccagcaactgttgtgtaaag
ctgcaaaatgcaaactga
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integrated database retrieval system
