Xenopus tropicalis (tropical clawed frog): 100125138
Help
Entry
100125138 CDS
T01011
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100125138 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
100125138 (nvl)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100125138 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
AAA_2
TIP49
AAA_28
NPHP3_N
Mg_chelatase
AAA_33
RNA_helicase
AAA_17
nSTAND3
AAA_18
Viral_helicase1
ABC_tran
AAA_3
Rad17
Vps4_C
NACHT
TsaE
ATPase
NB-ARC
Zeta_toxin
IstB_IS21
nSTAND_NTPase5
Parvo_NS1
Sigma54_activ_2
DUF815
Sigma70_r1_2
Motif
Other DBs
NCBI-GeneID:
100125138
NCBI-ProteinID:
NP_001096509
Xenbase:
XB-GENE-958000
UniProt:
A4QNC7
LinkDB
All DBs
Position
5:8859881..8890812
Genome browser
AA seq
852 aa
AA seq
DB search
MKNWPGSPGIDRRLKHRLTEYLSSNKCGGYVDIGVVAADLQRIYSADYGRRKQNAFRIQV
EKVFKVISSENVIEAQEEAHLAKRAKRGEDGNLEILSDCTDSDDYEDQPSSNHMNNSLLS
LYRKGNPDSLLETPTKNDPDTSTPAHPSKNASVAATGVPQVTRTPEAGWFIDKTPSRAMK
QNILIDLCEDSAEVSHSGQKENPPDLSLLESEKKRKTPKTRNGRKSKSKSSDVDGEIEDR
LLSNKGKLPELQRSSVRFEDIGGNEDTLKEVCKMMIHMRHPEVYQHLGVVPPRGFLLHGP
PGCGKTLLAQAIAGELDLPMLKVAATEMVSGVSGESEQKLRELFEQAVSSAPCILFIDEI
DAITPKREVASKDMERRIVAQLLTCMDDLNSLAVTAQVLVIGATNRPDSLDPALRRAGRF
DREICLGIPDEGARKRILQTLCRKLKLPEPFDYCRLAHLTPGYVGADLMALCREAAMCAV
NRVLIQLKEQQATPEAAVEETAPQPEALALQAEKQTTGPAQSELHRLLALLQEHTPLPEE
ELQSLCIEMDDFLGALPSVQPSAKREGFATVPDVTWADIGALEEIREELTMAILAPVKNP
EQFKALGLMAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVR
QVFQRASNSSPCVIFFDEIDALCPRRSGYESGASVRVVNQLLTEMDGLESRRQVFIMAAT
NRPDIIDPAILRPGRLDKTLYVGLPPPADRLAILKTITKDGTRPPLEADVDLEAIAGDEC
CDCFTGADLSALVREASVSALRQEMLGLEPPTNRGQIKVSRRHFEEAFSKVKPSVSKKDQ
LMYENLRQSLSR
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactggccgggctctcccgggattgacaggaggctcaagcaccgcctcaccgag
tatctgagcagtaacaaatgcggcggctatgtggatatcggagtagtagcggctgatcta
cagaggatatacagtgcagactatggcaggcggaaacagaatgccttccgaatacaggtg
gaaaaagtgtttaaggttatcagcagtgagaatgtcattgaagcgcaggaggaggcgcac
ctggcgaaaagggccaaaaggggagaagatgggaatctagaaattttgtcggactgtaca
gatagtgacgactatgaagatcagccttcctccaatcacatgaacaattctctgctgtcc
ttgtaccgcaaagggaaccctgactccttattggagactcctaccaaaaatgacccagac
accagcaccccagcgcacccgtctaagaacgccagtgttgcagcaaccggggtcccccag
gtcactaggaccccagaagctggctggtttatcgacaaaactcccagtagagcaatgaag
caaaacatcctcatagatctgtgcgaggattcggcagaggtgtctcactcagggcagaag
gagaaccccccagacctttccctcttggagagtgaaaagaagaggaagacaccgaagacc
aggaatgggcgaaagtcaaaaagcaaatcttctgatgtagatggggaaattgaggaccgt
ctccttagcaataaaggtaaactcccagagctgcagcgttcttctgtgaggttcgaggat
atcggtggaaatgaagataccctaaaggaggtctgcaaaatgatgattcacatgcgtcac
cctgaagtttaccagcacctgggtgtggtgcccccgcgggggttccttctgcacggaccg
ccaggatgtggcaaaaccttgctggctcaggcaattgctggggagctggacttgccaatg
ctcaaggtggcagccactgaaatggtttcgggcgtttctggagagtcggaacagaagctt
cgggagctcttcgagcaagcggtgtccagcgccccctgcatcctgttcatagatgagatt
gacgccataaccccaaaaagagaagtggcttctaaggatatggagaggaggattgtggcc
cagttactgacctgcatggacgatttgaacagcctcgctgtaactgctcaggtcctcgtc
attggagccaccaaccggcccgattcactagaccccgcgctgagacgcgctgggaggttc
gaccgggaaatctgcctggggattcctgatgaaggagccagaaagaggatcctgcagacg
ttgtgccgcaagctgaaactcccagaaccctttgactactgccgtctggctcatctgacc
ccgggatacgtgggggctgacctgatggcgctgtgccgggaagccgcaatgtgcgcagtg
aacagagtgcttatccagctgaaggaacagcaagctaccccggaggccgctgtggaagag
acagccccccagccagaagccttagctttgcaagcagagaaacagacaactggacctgcc
cagagtgagctgcaccgcttgctggccttgctacaagagcacactccattaccggaggag
gagctgcagagcctgtgtatcgagatggacgatttccttggcgccttgccctccgtacag
ccatctgctaagagagaaggctttgccaccgtccctgatgttacctgggctgatattggg
gcccttgaggaaatccgtgaagagcttaccatggccattctggcgccggtgaagaatcca
gaacagtttaaagctcttggcctgatggccccagctggtgttttactggcaggaccccca
gggtgtggcaaaacattactggcaaaggctgttgccaacgaatccggactcaattttatt
tcggtgaaaggcccagagctgctaaacatgtacgttggggagagtgaacgcgccgtccgg
caggttttccagagggcgtccaactcctccccttgcgtgatattttttgatgagattgat
gctctttgccctcgtagatctggctatgagtcgggtgccagtgtgcgggtagtgaaccag
ctactgaccgagatggatgggctggaaagccgtcgccaggtgttcataatggcagcgaca
aaccgaccagatatcattgacccagccatcctgcggccgggacgccttgacaaaaccctg
tacgtggggcttcctccccctgcagaccggcttgccattttaaagaccatcaccaaggat
ggaacccgcccacccttggaagcggatgtagacctggaagcgatcgctggggatgagtgc
tgcgactgtttcacgggtgcggatctctcggccctcgtgcgggaagcgtcagtaagtgcc
ctgaggcaagagatgttggggctggagccgcccacaaacagagggcagataaaggtgagc
cgaaggcattttgaagaggctttttcaaaagtgaaaccctccgtatccaagaaggatcag
ctgatgtacgagaacctgcgccagtcactcagccgatag
DBGET
integrated database retrieval system
