Xenopus tropicalis (tropical clawed frog): 100125212
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Entry
100125212 CDS
T01011
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100125212 (bbs1)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
BBSome
100125212 (bbs1)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Motif
Other DBs
NCBI-GeneID:
100125212
NCBI-ProteinID:
NP_001116276
Xenbase:
XB-GENE-979088
UniProt:
B1H2V5
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Position
4:complement(37957015..37975565)
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AA seq
585 aa
AA seq
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MAAVQPLLCESRSKWLDAHYDPVAGLNTLSSCIALADLHGDGDFKMVVGDMGHGPYNMKL
KVYKGTARMSENALLDLPTGVAAFLMDQNEPRTPAIAVASGPFIYVYKNLRPYFKFTLPA
MEVNALEKEVWDQAKEDKIDPVTLKEMLESIRDKAEIPLSVRSLRFLMLELQEMEAFVNT
YKQQPLKRQTVITCMGTLKKNMADEDAVCCLVIGTESGELFILDPEAFTILTRVSLSSVP
TLLDVTGQYDIEYRITVACRNGNVYILRRDSKRPKYCIELSAQVVGLVRVQKNIMIGTSH
ETLHGYSQKGKRLWTVTLPASIMTMSLLEQKSRGIQAVLVGLKNMEVHLYRDKNLLSVIN
TPDIVTGLCFGRYGREDDTLIMSTQGGGLLIKILKRTAQFEDKDTAPGPPTGQSIKLNVP
KKTKLYVDQTLRERENAVAMHRVFQMDLYRLRLSAARAYVKALDASLAPVSSTMQEPLTL
NAAVQGIGPQFKLILNLQNTSVNRPSMQLLISFLYDEKLYKIKPAFFKVPLLVPGLNYPI
ETFVECCSDKGISDIIKVFVLREGKSTPLLTAHINMPVSEGLAAA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtacagccgttactatgtgaatctcgctcaaagtggttggatgctcactat
gaccctgttgctggacttaataccctttcctcctgcattgctcttgcagacttgcatgga
gatggagactttaaaatggttgtgggtgacatgggacatggtccatataacatgaagcta
aaggtgtataaagggacagcacgaatgtctgaaaatgctctgcttgacttgcccactggt
gtggctgccttcctaatggaccaaaacgagccacgcaccccagccattgctgtagcctct
ggaccattcatctatgtatacaagaatctgaggccttactttaaattcactcttccagcc
atggaagtcaatgctcttgagaaggaagtgtgggatcaagcgaaagaggacaaaatagac
ccagtgactttaaaagagatgttggagagcatcagagacaaggcagagattcctctatct
gttcgatcattgcgattcttgatgttggaactgcaggagatggaggcatttgtgaacact
tataaacaacaacctctaaagcgtcagactgtgatcacctgtatgggcactctgaagaag
aatatggcagatgaggatgctgtgtgctgcctagtgattggtacagaaagtggagagctg
ttcattctggatccagaggcatttactattttgacacgggtcagcctttccagtgtgcca
acacttcttgatgtaaccggacaatatgatattgagtatcgcattacagttgcctgtcgg
aatggcaatgtgtatattcttcgaagagattccaagaggccgaaatactgtattgagctt
agtgcacaagtggtagggctggtacgtgtgcagaagaacatcatgattggaacttcccat
gagacattacatgggtactcccaaaagggtaagcgcctgtggacagtaacactacctgca
tctatcatgacaatgtctttgctggagcagaaatcacgcggtatccaggctgtgctggtc
ggactgaagaacatggaagttcatttatacagagacaagaaccttttaagtgttataaac
acaccagacattgtgactggtctttgttttgggcgctatggaagggaggatgatacttta
attatgagcacacaaggaggaggtctactcattaagatcctgaagaggactgcacagttt
gaagacaaagatacagctcctggccctcccacagggcaaagcattaaactcaatgtcccc
aagaaaactaaactgtatgttgaccagacactgagagagagggagaatgctgtggcaatg
caccgggtatttcagatggatctgtaccgcctgaggctgagtgctgccagggcatatgta
aaagcattggatgccagcctggctccagtttcttcaacaatgcaagagccactgactctg
aatgctgctgtgcagggcattggtcctcagttcaagctgattctgaacttacaaaacaca
tcagtgaaccgtccttcaatgcagctacttatcagcttcttatacgatgaaaagctttac
aagatcaagccagcattttttaaggttcctctgctggttccaggattgaattatccaatt
gaaacatttgttgaatgctgcagcgataaagggatctcagatatcattaaggtttttgta
ctgagggaaggaaagagcacaccacttctgactgctcatatcaacatgcctgttagtgag
gggctcgctgctgcttga
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