Xenopus tropicalis (tropical clawed frog): 100125782
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Entry
100125782 CDS
T01011
Symbol
cdh16
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100125782 (cdh16)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Major cadherins
100125782 (cdh16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
DUF5420
Motif
Other DBs
NCBI-GeneID:
100125782
NCBI-ProteinID:
XP_002942039
Xenbase:
XB-GENE-940006
UniProt:
A0A8J0QTK8
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Position
4:complement(66958378..67031987)
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AA seq
829 aa
AA seq
DB search
MVGRYYLYLFLLLSITSQIINSSSQVKQYIEVPENYKGSFPWYLGKIILATDGQYNTELA
GNDEEIFGVDPESGFLYALKPFDRERKASYTLQVTLRKGVEEEILSQMVTIHIMVKDEND
NMPVFTENTFYGIVSKGTKQGVAFMHVNATDLDDSSTPNADLRYKLISRYPARSYENMFQ
VDPKTGAISLTEQGVSSLSKLEVKHFKLEVQVKDFGDEPMGYTSVANLEISVAENTWIAE
SPVLLQENQKGGYPRIISEVKWNSTELHYSLKGDFSGEVFRIDEDGKIYIMSELDRETQA
EYQIEVSAMNDEDIPYADHLLIVIKVIDENDNTPTFPQDTYHVDVTERTTKGTLLVHLTA
TDADDRNTKNAQIRYKITSQEPKLPKDFLFHLEEHTGHLTLQDAKLKASIAKKYKLEISA
TDLGGDPEGLSSTCFVFINVIDVNDSPPVFVKNKFAPFLIPEDAQTGMLIITLTATDEDE
QIENKIIDFYIQSGNEDGTFGITTNQEQSTMTIFLEKDLDYEQTQEYNLIITVRNRAELL
GTEYSPTSTAAIHIMVVNVNEAPVFTQKKYEVRVPESAQAGSVILAVEASDPDIYHQAGL
IYSIRNDSKRCLSIQEHSGKIQLLHSLDREVFEDTYTVQVLVQEKGDRGLSATADVVIYI
LDVNDNIPILVGDYSEEYFCTPRRDNQRIIIRAFDLDSVENSAPFTFTLSNEPTLQSRWR
VTALNGTHAYLSMGISYLEPRVHYVLIIITDSGTPPQSQHVHLPVTVCRCSTRGFCKIEV
EKMENMPTISSALGILLGTLGAIGFFLIIIFAHMSLGAPSKQTRKSDTV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggttggaaggtactatttatacttgtttcttctcctctccattacatctcagatcata
aattcctcttcccaagttaaacaatatattgaggttcctgaaaattacaaaggctcattt
ccctggtaccttggcaagataattcttgcaacagatggtcaatataatacagagcttgct
ggaaatgatgaagaaatatttggagttgatccagagtcaggctttctttatgccctcaaa
ccatttgatcgtgagaggaaggcatcctatacgctccaggtaaccctgagaaaaggtgtg
gaggaggagatattatcccagatggtcactattcatataatggtaaaagatgagaatgac
aatatgcctgtctttacagagaacacattctatggaattgtaagcaaaggaacaaagcaa
ggagttgcttttatgcatgttaatgcaacagatttagatgattcctcaacacccaatgca
gacttgcgttacaaattgatctctcgttaccctgctagatcctatgaaaatatgtttcag
gtagatccaaagacaggagcaatctcattaacagagcaaggtgtttcttcattatccaaa
ctggaggtgaagcatttcaaacttgaagtccaggtcaaagatttcggagatgaacccatg
ggatatacttcagtcgcaaacctggaaatcagtgttgcagagaatacctggattgccgaa
agtcctgttcttcttcaagagaatcagaaaggtggctaccctcggatcatttccgaggtg
aagtggaacagcactgaacttcattattccctgaaaggagactttagtggagaggttttc
agaattgatgaggatggaaaaatttacatcatgagtgaactggatagagaaacacaagca
gagtaccagattgaggtctctgctatgaatgatgaagacattccatatgccgatcattta
ctgatagttatcaaagtcattgatgaaaatgataatacaccgaccttcccacaggacaca
taccatgtagatgttacagaaagaactacaaaaggtacacttcttgttcatctaacagct
acggatgctgatgataggaacaccaagaatgcccagataaggtacaaaattacaagccag
gaaccaaaactaccaaaggatttcttatttcaccttgaggaacatactggccatttgaca
ctgcaagatgccaagttaaaggcaagcattgcaaagaaatacaagctggaaatctcagct
actgatcttgggggagatcctgaaggtctgagcagtacctgcttcgttttcataaatgtg
atcgatgtaaatgacagtcctccagtatttgtaaagaacaagtttgctccatttttaatt
ccagaggatgcacagacaggaatgctaattatcacactaacagcaacagatgaagatgaa
cagatagaaaataaaatcatagacttttatatacagtcaggaaatgaggatggaaccttt
ggaatcacaactaaccaagaacaatccacaatgaccatcttccttgaaaaggatctggac
tatgaacaaacacaggaatacaatttgattattaccgtaaggaacagggctgaactgtta
ggaacagagtacagtccaacttctactgctgcaatccatattatggtggtaaatgtgaat
gaggctcctgtttttacccagaagaaatatgaggtcagagtgccagaaagtgcccaggct
ggttcagttatactcgctgttgaggcttctgatcctgatatataccaccaggcgggccta
atttacagcattaggaatgattccaagagatgcctgtccatccaagagcattctgggaag
attcagcttcttcattctttggacagagaagtctttgaagacacatacactgtgcaggtg
ttggtgcaggaaaaaggtgaccgtggtctatcagctacagcagatgttgtcatttacatc
ctggatgtcaacgataatatcccaattttggtgggagactattctgaagaatatttctgc
accccaagaagagacaatcagagaatcatcatcagggcttttgacctagactcagtggaa
aacagtgccccgtttaccttcacactttcaaatgagccaacacttcagtcaagatggagg
gtaacggcacttaatgggacacatgcctatttatcaatggggattagttacctggagcct
agggtgcattacgttctaatcattataacagatagtgggacaccccctcaaagtcagcat
gtgcaccttccagtgactgtgtgccgttgcagcaccagggggttttgcaagatagaagtg
gaaaagatggaaaacatgccaacaatatcatctgctcttggcatcttgctgggaacttta
ggagccataggtttcttcttaattataatcttcgcacacatgtcacttggagcccccagc
aagcagactagaaaatctgacactgtgtaa
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