Xenopus tropicalis (tropical clawed frog): 100126067
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Entry
100126067 CDS
T01011
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100126067 (kcmf1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100126067 (kcmf1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100126067 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
Zn_SUZ12
TFIIA
Dicty_REP
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
100126067
NCBI-ProteinID:
NP_001116279
Xenbase:
XB-GENE-1021676
UniProt:
B1H326
LinkDB
All DBs
Position
1:94530128..94566059
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AA seq
381 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVD
FDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRTNMHFTSSSTGG
LSSSQSSYSPSNREAMDPIAELLSQLSGVRRSTGGQLNSSGPSASQLQQLQMQLQLERQQ
AQAARQQLETARNATRRNNASNVTTTITQSTAATNTSSTENNQQSIQNSQFLLTRLNDPK
MTEAERQSIESERADRSLFVQELLLSTLMQEESSSSDEDERGEIADFGAMGCVDIMPLDV
ALENLNLKESNKGNEPPPPPL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgaaggtgtcagctgcgatgcatgtttgaaaggaaatttccgtggccga
aggtacaagtgtttaatttgctacgattacgatctgtgtgcttcttgttatgaaagtggt
gcaacaactacaaggcatacaactgaccatccaatgcagtgcatattgacaagggtagac
tttgatttatattatggtggggaagcattctctgtagaacagccacagtcttttacttgc
ccttattgtggtaaaatgggttatacagaaacctctttacaagaacatgtcacttcagaa
cacgcagaaacgtcaacagaagtaatttgtccaatatgtgcagcattgccagggggagat
ccaaatcatgtcacagatgactttgctgcccatctcacacttgaacacagagctccaaga
gatttagatgaatccagtggagttcgacatgtacgaaggatgtttcaccctggccggggg
ctaggtggtccacgagcacgtagaacaaacatgcactttactagcagctcgactggaggg
ctttcttcctcgcagagctcatattctccaagcaatagggaagccatggatcctatagct
gaacttttatcacagttatctggagtaaggcgttcaacaggagggcagctcaactcttca
ggcccatctgcatcccagctgcagcaactacaaatgcagttgcaactagaaagacaacag
gcacaggcagcacggcaacaactagaaacagcacgcaacgcaaccagacgcaacaatgca
agtaatgtcaccaccacaattacacaatcaacagcagcaaccaacacatcaagtacggaa
aacaatcagcaatctatacaaaattcacagtttctactcacaaggctgaatgatcccaaa
atgacagaagcagaacgacagtcaatagaaagtgagcgtgcggaccgaagcttgtttgtc
caggagcttcttttgtctacgttgatgcaggaagaaagttcctcctctgatgaggatgaa
aggggagaaatagctgattttggggcaatgggttgtgtagatataatgcctttagatgtt
gctttagaaaacctaaatcttaaagagagtaataaaggaaacgagcctccgccacctcct
ctttga
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