Xenopus tropicalis (tropical clawed frog): 100126215
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Entry
100126215 CDS
T01011
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04810
Regulation of actin cytoskeleton
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100126215 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100126215 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100126215 (cyfip2)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100126215 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
100126215 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
Spore_SspJ
BP28CT
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
100126215
NCBI-ProteinID:
NP_001103523
Xenbase:
XB-GENE-922699
UniProt:
A8KBE6
LinkDB
All DBs
Position
3:complement(14067209..14129718)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCNEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIETSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMVKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQSSLREPLRQAVRKKKNVLISVLQAIRKTVCDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVQAIEEFHKQSFF
FTHLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLSDQIFAYYKAMSGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLDINRLTHRLLSKHLTLDSFDAMFREANHNVSAPYGRNTL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVELHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAVLNKYMKSVESDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccacgtgacgctggaggatgcgttatcgaacgtggacctcctggaggagctg
ccgctccccgaccagcagccatgcatcgagcctcctccatcctccatcatgtaccaggcc
aactttgataccaattttgaggaccggaatgcatttgtaactgggatagccagatatata
gaacaggccacggtacattccagcatgaacgagatgctggaggaggggcaggagtatgca
gtcatgctctatacgtggagaagctgttccagggctattccacaggtgaaatgtaatgag
cagccgaaccgtgtggaaatatacgagaagacggtggaggttttggaacctgaagtgact
aaactgatgaagttcatgtatttccagcgcaaggccattgagcggttctgcaatgaggtg
aagcgattgtgccacgcggagcgcaggaaggactttgtgtcggaggcatacctgctgacc
ctggggaagtttattaacatgtttgcagtgctggacgagctgaagaacatgaaatgtagt
gtaaagaatgaccactcggcttataagcgggctgcccagtttcttaggaaaatggccgat
ccccagtcgatccaggagtcacaaaacctgtcaatgttcttggccaatcacaatcggatc
acacagtgcctgcaccagcaactggaggttatcccggggtatgaggagctccttgctgat
attgtgaatatatgtgttgattactatgagaacaagatgtacctgactccaagcgaaaag
cacatgctactaaaggtgatgggatttggcctgtacctgatggacgggaatgtcagtaat
atttataaacttgatgccaagaagagaattaacctcagcaaaattgataaattcttcaag
cagctgcaggtggtgcccctgtttggtgacatgcagatagagctggccagatacattgag
accagtgctcactatgaggagaacaaatcaaagtggacttgcactcagagcagcatcagt
cctcagtataacatatgtgagcagatggtacagatccgagatgaccacatccgtttcatc
tctgaactggcgcgctacagcaacagtgaggtggttactggatctgggttggacagccaa
aagtcagatgaagagtatcgggagctctttgatttggcccttagaggtcttcagctgctg
tcaaaatggagtgctcatgtcatggaagtgtactcctggaagctggttcaccccacagac
aagttctgtaataaggattgccctggcacggcggaggagtatgaacgagccacgaggtac
aattataccagcgaagagaaatttgcctttgtggaggtcattgccatggtgaaaggtctt
caggttttgatgggcagaatggagagtgtgtttaaccaagccatacgcaacaccatatac
gctgccttgcaggactttgcccaaagcagcttgagggaaccacttaggcaggccgtgcgc
aagaagaagaatgtcctgatcagtgtccttcaggccatacgaaagactgtatgtgactgg
gagggaggccgagagcctccaaatgacccttgtttgcgtggagaaaaggacccaaaaggc
ggttttgatatcaaggtcccgcggagagctgttggtccctccagtacccagttatacatg
gtgcgcacaatgctggagtctctgattgctgataagagcggctctaagaagaccttacgg
agcagtcttgatggacccatagttcaggcgattgaggaatttcataagcagtccttcttc
ttcactcacctcctcaacttcagcgaggccctacagcagtgctgtgacctttcccagctc
tggttccgagagttctttctggagctgactatgggtcgacgcatccagttccccatcgag
atgtccatgccttggatcctgactgaccacatccttgagaccaaggagccttccatgatg
gagtatgtgctatatcctctggacctctacaatgacagcgcctactatgctttgaccaaa
tttaagaaacagtttttgtacgatgaaattgaggcagaggtgaatttgtgtttcgaccag
ttcgtttacaagctctctgatcagatctttgcttattacaaagccatgtctgggagtgtc
ttgctagacaaacgtttccgtgccgaatgcaagaactatggggtgattattccataccca
ccctccaatcgatatgaaactctgctcaagcagcgacatgtacagctactgggcagatcc
attgacctgaacagactcatcactcagcgcatctcagccgccatgtacaagtctttagat
caagcaatcagccggtttgaaagtgaggatctgacttctatcgtggaactggagtggctg
cttgacatcaatcgcttgacccaccggcttctctccaagcacctgaccttggatagcttt
gatgccatgttccgagaggccaatcacaacgtgtcagctccctatgggaggaacaccctg
catgtcttctgggaactcaattttgacttccttcccaactactgttacaatggctcaacc
aatcggtttgtacgtaccgccatcccattcacacaggagccacagagagataaacctgca
aatgtgcagccatattacctctatggatcaaagcctctcaacattgcctacagtcacata
tacagttcataccggaacttcgttggaccaccccattttaagaccatctgccgcctactg
gggtatcagggtattgcagtcgtcatggaggagctgctgaaaattgtcaaaagcctgctc
caggggactatactgcagtatgtaaagacgctaattgaggttatgccaaaaatctgccga
ctgccaaggcacgaatacggctctcctgggatccttgagttctttcaccaccagctgaag
gacattatagagtatgcagagctaaagacagatgtattccagagtctacgagaggtgggc
aatgccattctcttctgtctgctcatagaacaggcactgtctcaagaggaagtgtgcgac
cttctccatgcagcccccttccagaatattttaccacgtgtctatattaaagagggggaa
cgcctggaggtgaggatgaaacgcctggaagctaaatatgcccctctccatcttgtccca
ttgattgagcggctggggacacctcagcaaatcgccattgcgcgggaaggagatcttctc
accaaggaacgcctgtgctgtggcctctctatgttcgaagtcatcctgacacgaattcgt
agctatttgcaggaccccatctggcgcggcccgccccctaccaacggagtgatgcacgtg
gatgaatgtgtcgagttgcaccgcctatggagtgccatgcagttcgtctactgtatccct
gtagggacaaatgagttcacagcagaacagtgttttggagatgggttaaactgggctggt
tgcgccatcatcgtgcttcttggacagcagcgcaggttcgacctgtttgatttctgttat
catctcctgaaggtgcaaaggcaggatgggaaggatgagatcataaagaatgtgccccta
aagaaaatggccgacagaattcgcaagtaccagatcctgaacaacgagatctttgctgtc
ctgaacaaatatatgaagtcggtggagagtgacagctccacagtggagcacgtccgttgc
ttccagccccccatccaccagtccctggctaccacctgctga
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